Gene omics information

Query gene ID	Ta.9344.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.60	81.0	Ta.9344.1.S1_at	CD917189	-	-	1e-12	At1g27440	GUT2	S.X.	H.G.	Please select
0.77	90.8	Ta.1839.1.S1_x_at	CA603626	fasciclin-like protein FLA26	-	2e-4	At2g35860	FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)	S.X.	H.G.	Please select
0.71	88.0	Ta.1839.1.S1_at	CA603626	fasciclin-like protein FLA26	-	2e-4	At2g35860	FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)	S.X.	H.G.	Please select
0.67	86.3	Ta.11921.1.S1_at	CA722130	-	-	6e-1	At2g45380	-	S.X.	H.G.	Please select
0.36	51.9	Ta.4447.2.S1_x_at	CA607764	-	-	2e-25	At4g32410	CESA1 (CELLULOSE SYNTHASE 1)	S.X.	H.G.	Please select
0.32	44.4	Ta.9440.1.S1_at	BJ283686	-	-	8e+0	At4g27900	-	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.4	96.8	GSM138164	genotype D15 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.0	96.3	GSM138182	genotype A10 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.0	96.3	GSM111228	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.8	96.0	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.7	95.8	GSM111226	genotype F48 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.6	95.6	GSM138147	genotype G13 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.6	95.6	GSM111196	genotype J15 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.3	95.0	GSM138186	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.3	95.0	GSM111238	genotype A91 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.2	94.8	GSM111200	genotype D39 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.24	8e-57	222	Ta.25250.1.A1_at	CD454945	-	-	7e-18	At1g27440	GUT2	C.G.	S.X.	Please select
0.33	1e-43	178	Ta.7247.1.S1_at	CK203779	-	-	6e-39	At5g61840	GUT1	C.G.	S.X.	Please select
0.07	2e-23	111	TaAffx.86385.1.S1_at	CA609733	-	-	1e+1	At5g64720	unknown protein	C.G.	S.X.	Please select
0.12	5e-18	93	Ta.7247.2.S1_a_at	CA730025	-	-	2e-2	At1g21327	unknown protein	C.G.	S.X.	Please select
0.10	8e-17	89	TaAffx.113164.1.S1_at	CA617544	-	-	2e-4	At5g61840	GUT1	C.G.	S.X.	Please select
0.14	1e-15	85	Ta.22487.3.S1_a_at	CA651571	-	-	3e-4	At5g61840	GUT1	C.G.	S.X.	Please select
0.10	7e-14	79	Ta.26940.1.A1_at	CD491204	-	-	9e-18	At1g27440	GUT2	C.G.	S.X.	Please select
0.10	5e-12	73	Ta.7247.3.S1_at	CA648467	-	-	6e-16	At5g61840	GUT1	C.G.	S.X.	Please select
0.14	7e-8	59	Ta.996.1.S1_at	CD898871	-	-	4e-24	At1g27440	GUT2	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	1e-12	75	Arabidopsis thaliana	At1g27440	839635	GUT2	F:glucuronoxylan glucuronosyltransferase activity, catalytic activity;P:secondary cell wall biogenesis, glucuronoxylan biosynthetic process;C:endomembrane system, membrane;PMOBF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.20	4e-19	97	Glycine max	GmaAffx.2745.1.S1_at	BF009213	-	-	5e-61	At5g61840	GUT1	C.G.	S.X.	Please select
0.62	0	898	Hordeum vulgare	Contig3966_at	Contig3966	-	-	3e-15	At5g61840	GUT1	C.G.	S.X.	Please select
0.51	0	948	Oryza sativa	Os.12406.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.13	2e-11	71	Populus trichocarpa	Ptp.1780.1.S1_at	AY935506.1	hypothetical protein	-	2e-143	At1g27440	GUT2	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.17	5e-6	52	Vitis vinifera	1617755_at	CF213513	-	-	2e-33	At1g27440	GUT2	C.G.	S.X.	Please select
0.52	0	916	Zea mays	Zm.6358.1.S1_at	CA402045	hypothetical protein LOC100273975 /// hypothetical protein LOC100274514	-	5e-18	At5g61840	GUT1	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage