Gene omics information

Query gene ID	Ta.9324.2.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.99	100.0	Ta.9324.2.S1_a_at	CA659465	-	-	4e-4	At5g36290	unknown protein	S.X.	H.G.	Please select
0.27	35.6	Ta.25423.1.S1_at	CD374054	-	-	2e+0	At3g14480	glycine/proline-rich protein	S.X.	H.G.	Please select
0.27	35.6	TaAffx.84726.1.S1_x_at	CA630343	-	-	2e+1	At2g12170	unknown protein	S.X.	H.G.	Please select
0.27	35.6	Ta.1026.1.S1_a_at	CA693360	-	-	7e-22	At5g25760	PEX4 (PEROXIN4)	S.X.	H.G.	Please select
0.26	33.6	Ta.2408.2.S1_a_at	CA644611	-	-	1e+0	At1g53890	unknown protein	S.X.	H.G.	Please select
0.25	32.1	Ta.1043.1.S1_at	CK167660	-	-	2e-4	At3g52800	zinc finger (AN1-like) family protein	S.X.	H.G.	Please select
0.25	32.1	Ta.1026.3.S1_x_at	CA700666	-	-	4e-26	At5g25760	PEX4 (PEROXIN4)	S.X.	H.G.	Please select
0.24	30.3	TaAffx.119172.1.A1_at	BJ285444	-	-	1e+0	At4g23895	pleckstrin homology (PH) domain-containing protein-related	S.X.	H.G.	Please select
0.23	29.0	Ta.9230.1.S1_x_at	BQ169651	-	-	5e-1	At4g32030	unknown protein	S.X.	H.G.	Please select
0.23	29.0	Ta.14605.1.S1_at	BQ838001	-	-	3e-1	At5g64160	unknown protein	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.5	97.8	GSM138187	genotype F38b developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.0	97.4	GSM111228	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.2	96.6	GSM138189	genotype F38a developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.2	96.6	GSM138211	genotype B65 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.0	96.3	GSM138158	genotype F36 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.7	95.8	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.5	95.4	GSM138177	genotype A40 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.5	95.4	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM138184	genotype C25 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e-1	36	Ta.22686.1.S1_at	CA651598	-	-	3e-17	At4g02930	elongation factor Tu, putative / EF-Tu, putative	C.G.	S.X.	Please select
0.03	4e-1	36	Ta.14999.1.S1_at	CA686699	-	-	3e+0	At4g18501	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.85498.1.S1_at	CA622179	-	-	4e+0	At5g36910	THI2.2 (THIONIN 2.2)	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.7638.1.S1_at	CA655164	-	-	4e+0	At1g69640	SBH1 (SPHINGOID BASE HYDROXYLASE 1)	C.G.	S.X.	Please select
0.03	2e+0	34	Ta.3496.2.S1_a_at	CA630377	-	-	3e-1	At1g31250	proline-rich family protein	C.G.	S.X.	Please select
0.02	2e+0	34	Ta.22231.1.S1_at	CA639859	-	-	5e-4	At3g13065	SRF4 (STRUBBELIG-RECEPTOR FAMILY 4)	C.G.	S.X.	Please select
0.02	2e+0	34	Ta.10386.1.A1_at	BJ249523	-	-	1e-1	At1g29610	-	C.G.	S.X.	Please select
0.02	6e+0	32	TaAffx.85481.1.S1_at	CA622394	-	-	3e-1	At1g68907	-	C.G.	S.X.	Please select
0.03	6e+0	32	TaAffx.78868.1.S1_at	CA725528	-	-	8e-1	At2g47670	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	4e-4	46	Arabidopsis thaliana	At5g36290	833627	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;BMOPFA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.11	6e-7	56	Glycine max	Gma.10004.1.S1_at	BF070937	-	-	6e-25	At5g36290	unknown protein	C.G.	S.X.	Please select
0.59	0	787	Hordeum vulgare	Contig14363_at	Contig14363	-	-	4e-8	At5g36290	unknown protein	C.G.	S.X.	Please select
0.49	4e-104	379	Oryza sativa	Os08g0528500	AK111028.1	-	Protein of unknown function UPF0016 family protein	3e-2	At5g36290	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.10	6e-10	65	Populus trichocarpa	Ptp.1621.2.A1_at	CV261960	predicted membrane protein	-	1e-29	At5g36290	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.16	2e-15	81	Vitis vinifera	1611691_s_at	CB980403	hypothetical protein LOC100265089	-	6e-59	At5g36290	unknown protein	C.G.	S.X.	Please select
0.20	2e-25	115	Zea mays	Zm.5147.1.A1_at	CK787170	-	-	2e-25	At5g36290	unknown protein	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage