Gene omics information

Query gene ID	Ta.9308.2.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.9308.2.S1_x_at	BE411983	-	-	2e+0	At3g61070	PEX11E	S.X.	H.G.	Please select
0.80	92.2	Ta.9308.1.S1_at	CK211929	-	-	4e-5	At1g01820	PEX11C (PEROXIN 11C)	S.X.	H.G.	Please select
0.67	86.3	Ta.9308.2.S1_a_at	BE411983	-	-	2e+0	At3g61070	PEX11E	S.X.	H.G.	Please select
0.67	86.3	Ta.9308.1.S1_x_at	CK211929	-	-	4e-5	At1g01820	PEX11C (PEROXIN 11C)	S.X.	H.G.	Please select
0.44	64.5	Ta.28775.1.S1_x_at	CA680217	-	-	5e-39	At1g68010	HPR	S.X.	H.G.	Please select
0.40	58.4	Ta.28197.1.S1_at	BQ620267	-	-	2e-60	At3g14420	(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.4	98.9	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
8.1	98.8	GSM324495	Si+ B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.8	98.7	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.3	98.6	GSM324494	Si+ B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.1	98.5	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.8	98.4	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.6	98.3	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.5	98.3	GSM324491	Si+ B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.2	98.1	GSM143498	Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.2	98.1	GSM143508	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.98	0	2139	Ta.9308.2.S1_a_at	BE411983	-	-	2e+0	At3g61070	PEX11E	C.G.	S.X.	Please select
0.81	0	1249	Ta.9308.1.S1_at	CK211929	-	-	4e-5	At1g01820	PEX11C (PEROXIN 11C)	C.G.	S.X.	Please select
0.81	0	1249	Ta.9308.1.S1_x_at	CK211929	-	-	4e-5	At1g01820	PEX11C (PEROXIN 11C)	C.G.	S.X.	Please select
0.50	1e-137	490	Ta.9308.3.A1_at	CD452871	-	-	1e-1	At1g63522	-	C.G.	S.X.	Please select
0.42	3e-129	462	TaAffx.84810.1.S1_x_at	CA725328	-	-	2e-1	At1g01820	PEX11C (PEROXIN 11C)	C.G.	S.X.	Please select
0.32	9e-59	228	TaAffx.53617.1.S1_at	CA690639	-	-	1e-3	At2g45740	PEX11D	C.G.	S.X.	Please select
0.29	4e-39	163	TaAffx.57720.1.S1_at	CA625617	-	-	5e+0	At5g65390	AGP7	C.G.	S.X.	Please select
0.04	1e-8	61	TaAffx.39326.1.S1_at	BG909116	-	-	5e+0	At5g44170	-	C.G.	S.X.	Please select
0.02	2e-1	38	TaAffx.114927.2.S1_at	CA695484	-	-	1e+1	At5g55570	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	34	Arabidopsis thaliana	At3g61070	825279	PEX11E	member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	9e-1	36	Glycine max	PsAffx.C179000014_at	PsAffx.C179000014	-	-	3e-1	At1g61150	-	C.G.	S.X.	Please select
0.70	0	1120	Hordeum vulgare	Contig2813_at	Contig2813	-	-	1e-1	At1g01820	PEX11C (PEROXIN 11C)	C.G.	S.X.	Please select
0.42	6e-89	329	Oryza sativa	Os03g0117100	AK070213.1	-	Peroxisomal biogenesis factor 11 family protein	4e-2	At2g45740	PEX11D	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	9e-1	36	Populus trichocarpa	PtpAffx.217518.1.S1_at	pmrna32812	hypothetical protein	-	7e+0	At1g56220	dormancy/auxin associated family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e+0	32	Vitis vinifera	1619399_s_at	CB914618	-	-	1e-1	At2g30560	glycine-rich protein	C.G.	S.X.	Please select
0.46	1e-74	280	Zea mays	Zm.2440.1.A1_a_at	BM347886	peroxisomal membrane protein PEX11-1	-	2e-9	At1g01820	PEX11C (PEROXIN 11C)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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