Gene omics information

Query gene ID	Ta.9290.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.60	81.0	Ta.9290.1.S1_x_at	CD865398	-	-	8e-1	At1g14455	unknown protein	S.X.	H.G.	Please select
0.71	88.0	Ta.9290.3.S1_x_at	CA501890	-	-	9e-2	At5g57790	unknown protein	S.X.	H.G.	Please select
0.60	81.0	Ta.9290.1.S1_at	CD865398	-	-	8e-1	At1g14455	unknown protein	S.X.	H.G.	Please select
0.31	42.7	TaAffx.102859.1.S1_at	CA647205	-	-	3e-1	At5g40250	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.13	14.6	Ta.27319.1.S1_at	BT009349.1	-	-	2e-57	At3g01090	AKIN10 (Arabidopsis SNF1 kinase homolog 10)	S.X.	H.G.	Please select
0.08	9.4	Ta.7012.2.S1_at	CA708999	-	-	3e-15	At1g79870	oxidoreductase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.6	97.0	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.3	96.7	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM143498	Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.1	94.5	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.0	94.3	GSM111232	genotype H8 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.7	93.3	GSM143511	Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.6	92.9	GSM143492	Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.5	92.5	GSM143501	Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.5	92.5	GSM246384	SB165_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.89	0	1907	Ta.9290.1.S1_at	CD865398	-	-	8e-1	At1g14455	unknown protein	C.G.	S.X.	Please select
0.15	2e-54	214	TaAffx.8637.1.S1_at	CA622296	-	-	1e+1	At5g23760	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.25	1e-49	198	TaAffx.59597.1.S1_x_at	CA598223	-	-	4e+0	At1g68430	unknown protein	C.G.	S.X.	Please select
0.25	1e-49	198	TaAffx.59597.1.S1_at	CA598223	-	-	4e+0	At1g68430	unknown protein	C.G.	S.X.	Please select
0.19	1e-27	125	TaAffx.80234.1.S1_at	CA699579	-	-	3e+0	At1g68430	unknown protein	C.G.	S.X.	Please select
0.16	4e-18	93	Ta.9290.3.S1_x_at	CA501890	-	-	9e-2	At5g57790	unknown protein	C.G.	S.X.	Please select
0.06	1e-15	85	TaAffx.53026.1.S1_at	CA697544	-	-	6e+0	At5g20640	unknown protein	C.G.	S.X.	Please select
0.03	4e-9	63	Ta.3227.2.S1_x_at	CK198384	alternative splicing regulator	-	1e-17	At1g09140	SF2/ASF-like splicing modulator (SRP30)	C.G.	S.X.	Please select
0.03	2e-8	61	TaAffx.128748.1.S1_at	CK153512	-	-	9e+0	Atmg01280	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	8e-1	36	Arabidopsis thaliana	At1g14455	6240862	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POFM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e-3	44	Glycine max	GmaAffx.27600.1.S1_at	AW349476	-	-	5e-2	At1g56210	copper chaperone (CCH)-related	C.G.	S.X.	Please select
0.48	1e-96	353	Hordeum vulgare	Contig4477_at	Contig4477	-	-	4e-2	At4g10610	CID12	C.G.	S.X.	Please select
0.27	5e-47	190	Oryza sativa	Os03g0345700	9631.m02244	-	Hypothetical protein	3e-3	At1g22990	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	2e-2	42	Populus trichocarpa	Ptp.4194.1.S1_x_at	CV247315	histone 2	-	2e-49	At2g28720	histone H2B, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	1e-2	40	Vitis vinifera	1614610_at	CF200940.1	-	-	9e+0	Atcg00740	-	C.G.	S.X.	Please select
0.10	1e-13	77	Zea mays	Zm.949.1.A1_at	CF624182	-	-	1e-1	At5g15970	KIN2	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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