CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.9251.2.A1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 86.3 Ta.9251.2.A1_x_at CA606965 - - 3e-2 At4g00810 60S acidic ribosomal protein P1 (RPP1B) S.X. H.G.
0.67 86.3 Ta.9251.2.A1_at CA606965 - - 3e-2 At4g00810 60S acidic ribosomal protein P1 (RPP1B) S.X. H.G.
0.67 86.3 Ta.12715.1.S1_s_at BM134770 - - 3e-2 At4g00810 60S acidic ribosomal protein P1 (RPP1B) S.X. H.G.
0.44 64.5 Ta.9251.1.S1_x_at BQ162667 - - 9e+0 At3g25719 unknown protein S.X. H.G.
0.16 18.2 Ta.7046.2.A1_at BJ253526 - - 8e-1 At4g39540 shikimate kinase family protein S.X. H.G.
0.04 5.8 TaAffx.128570.1.S1_at CK217819 - - 2e-1 At1g61360 S-locus lectin protein kinase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.6 99.6 GSM314265 tissue type: seedling, crown - rep3 GSE12508 Transcription patterns during wheat development
10.0 99.1 GSM138178 genotype A88 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.9 99.0 GSM138184 genotype C25 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.9 99.0 GSM314267 tissue type: seedling, leaf - rep2 GSE12508 Transcription patterns during wheat development
8.4 98.9 GSM250914 Tc_7dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.3 98.8 GSM314273 tissue type: floral bracts, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
7.9 98.7 GSM138153 genotype G32 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.8 98.4 GSM314274 tissue type: floral bracts, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
6.4 98.2 GSM138186 genotype F38b developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.3 98.2 GSM314268 tissue type: seedling, leaf - rep3 GSE12508 Transcription patterns during wheat development
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.98 0 1806 Ta.9251.2.A1_at CA606965 - - 3e-2 At4g00810 60S acidic ribosomal protein P1 (RPP1B) C.G. S.X.
0.53 0 678 Ta.12715.1.S1_s_at BM134770 - - 3e-2 At4g00810 60S acidic ribosomal protein P1 (RPP1B) C.G. S.X.
0.75 1e-180 632 Ta.9251.3.S1_x_at CA703161 - - 5e-1 At3g26934 unknown protein C.G. S.X.
0.75 1e-180 632 Ta.9251.3.S1_at CA703161 - - 5e-1 At3g26934 unknown protein C.G. S.X.
0.56 2e-145 515 Ta.19085.1.S1_at CA603396 - - 5e-4 At4g00810 60S acidic ribosomal protein P1 (RPP1B) C.G. S.X.
0.63 8e-114 410 Ta.9251.1.S1_x_at BQ162667 - - 9e+0 At3g25719 unknown protein C.G. S.X.
0.33 3e-67 256 TaAffx.92117.1.S1_at BJ282796 - - 3e-2 At4g00810 60S acidic ribosomal protein P1 (RPP1B) C.G. S.X.
0.28 4e-54 212 Ta.4831.1.S1_at AJ611741 - - 1e-1 At4g00810 60S acidic ribosomal protein P1 (RPP1B) C.G. S.X.
0.31 1e-41 171 Ta.20562.1.S1_at BQ743969 - - 6e+0 At5g40040 60S acidic ribosomal protein P2 (RPP2E) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-2 40 Arabidopsis thaliana At4g00810 828004 60S acidic ribosomal protein P1 (RPP1B) F:structural constituent of ribosome;P:translational elongation;C:cytosol, cytosolic ribosome, ribosome, nucleus;MFPOA - - - C.G. S.X.
0.05 7e-7 56 Glycine max PsAffx.C118000036_at PsAffx.C118000036 - - 1e-1 At4g00810 60S acidic ribosomal protein P1 (RPP1B) C.G. S.X.
0.59 7e-162 569 Hordeum vulgare Contig4639_s_at Contig4639 - - 3e-2 At4g00810 60S acidic ribosomal protein P1 (RPP1B) C.G. S.X.
0.19 3e-16 87 Oryza sativa Os04g0667600 AK068657.1 - Heavy metal transport/detoxification proteindomain containing protein 2e+0 At1g15860 - C.G. S.X.
0.04 7e-1 36 Populus trichocarpa PtpAffx.219195.1.S1_at pmrna35047 hypothetical protein - 1e+0 At1g43890 ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18) C.G. S.X.
0.02 6e-1 34 Vitis vinifera 1621289_at CF207820 - - 2e-1 At3g44100 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein C.G. S.X.
0.11 9e-10 63 Zea mays Zm.7677.1.A1_at BM331802 metal ion binding protein - 1e+0 At2g35760 integral membrane family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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