CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.9239.1.A1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.9239.1.A1_x_at CD937104 - - 2e+1 At5g06210 RNA-binding protein, putative S.X. H.G.
0.91 98.2 Ta.9239.1.A1_at CD937104 - - 2e+1 At5g06210 RNA-binding protein, putative S.X. H.G.
0.55 76.8 Ta.29367.1.S1_at BJ224721 - - 5e-1 At5g46780 VQ motif-containing protein S.X. H.G.
0.50 72.4 Ta.14000.1.S1_at BQ789086 ethylene-responsive factor-like transcription factor ERFL1a - 1e-5 At5g44210 ERF9 (ERF DOMAIN PROTEIN 9) S.X. H.G.
0.46 66.8 TaAffx.65012.1.S1_at BG607332 - - 6e-4 At3g20580 COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR) S.X. H.G.
0.38 54.7 Ta.7143.1.S1_x_at BJ316053 - - 2e+1 At5g60840 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.8 99.3 GSM138184 genotype C25 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.9 99.1 GSM138169 genotype B68 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.9 99.1 GSM138188 genotype F38a developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.7 98.9 GSM138200 genotype F48 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.5 98.9 GSM111236 genotype F38b developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
8.3 98.8 GSM138154 genotype H5 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.0 98.8 GSM138195 genotype J15 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.6 98.7 GSM138198 genotype C22 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.2 98.5 GSM138153 genotype G32 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.8 98.4 GSM138136 Genotype Domain developing seed at 5 days after anthesis, biological rep1 location SB GSE5937 Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 1382 Ta.9239.1.A1_at CD937104 - - 2e+1 At5g06210 RNA-binding protein, putative C.G. S.X.
0.03 7e-3 42 Ta.17092.1.S1_at CA617709 - - 3e-1 At5g37200 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 3e-2 40 TaAffx.56834.1.A1_at CA642981 - - 3e-1 At1g64628 CPuORF57 (Conserved peptide upstream open reading frame 57) C.G. S.X.
0.02 1e-1 38 Ta.21555.1.S1_at BE419129 - - 2e+0 At5g48220 indole-3-glycerol phosphate synthase, putative C.G. S.X.
0.03 4e-1 36 TaAffx.58772.1.S1_at CA616173 - - 1e+1 At5g14450 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.02 4e-1 36 Ta.8746.1.S1_at BQ162318 - - 6e+0 At3g27831 - C.G. S.X.
0.02 2e+0 34 TaAffx.98394.1.S1_at BQ800660 Q-type C2H2 zinc finger protein - 6e-4 At5g43170 AZF3 (ARABIDOPSIS ZINC-FINGER PROTEIN 3) C.G. S.X.
0.03 2e+0 34 TaAffx.57895.1.S1_at CA624174 - - 1e+0 At5g53670 unknown protein C.G. S.X.
0.03 2e+0 34 TaAffx.38197.1.S1_at BJ245571 - - 1e+0 At3g54340 AP3 (APETALA 3) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+1 30 Arabidopsis thaliana At5g06210 830508 RNA-binding protein, putative F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:unknown;MPFOBA - - - C.G. S.X.
0.03 2e+0 34 Glycine max PsAffx.CL760Contig1_at PsAffx.CL760Contig1 - - 8e+0 At5g49015 Expressed protein C.G. S.X.
0.82 2e-134 478 Hordeum vulgare Contig2470_s_at Contig2470 - - 1e-1 At4g16380 metal ion binding C.G. S.X.
0.27 2e-29 131 Oryza sativa OsAffx.14373.1.S1_s_at - - - 0 C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.1205.2.S1_at DN496820 - - 1e-3 At5g02020 unknown protein C.G. S.X.
0.02 7e+0 30 Vitis vinifera 1621839_at CD715518 - - 5e+0 At4g14550 IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14) C.G. S.X.
0.19 1e-23 109 Zea mays Zm.18520.1.A1_at CF632042 - - 8e-3 At5g44210 ERF9 (ERF DOMAIN PROTEIN 9) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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