CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.9211.2.A1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.9211.2.A1_x_at CD879802 - - 5e+0 At4g23170 EP1 S.X. H.G.
0.60 81.0 Ta.9211.2.A1_a_at CD879802 - - 5e+0 At4g23170 EP1 S.X. H.G.
0.53 74.9 Ta.14589.1.S1_at BJ321559 - - 3e-106 At5g49460 ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2) S.X. H.G.
0.50 72.4 Ta.9211.2.A1_at CD879802 - - 5e+0 At4g23170 EP1 S.X. H.G.
0.43 62.2 Ta.9211.3.S1_x_at CA614768 - - 5e-6 At2g20810 GAUT10 (GALACTURONOSYLTRANSFERASE 10) S.X. H.G.
0.25 32.1 Ta.14073.1.S1_x_at BJ228415 - - 5e-36 At1g09430 ACLA-3 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.9 99.7 GSM139925 Anther tetrads rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
18.4 99.7 GSM139927 Anther tetrads rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.1 98.1 GSM139924 Anther telophaseI-telophaseII rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.8 97.9 GSM139922 Anther telophaseI-telophaseII rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.0 97.4 GSM139923 Anther telophaseI-telophaseII rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.8 97.2 GSM139930 Anther immature pollen rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0 96.3 GSM139926 Anther tetrads rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8 96.0 GSM139928 Anther immature pollen rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4 95.2 GSM139918 Anther leptotene-pachytene rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1 94.5 GSM314254 tissue type: germinating seed, root - rep1 GSE12508 Transcription patterns during wheat development
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 1120 Ta.9211.2.A1_at CD879802 - - 5e+0 At4g23170 EP1 C.G. S.X.
1.00 0 1120 Ta.9211.2.A1_a_at CD879802 - - 5e+0 At4g23170 EP1 C.G. S.X.
0.25 7e-67 254 Ta.9211.3.S1_x_at CA614768 - - 5e-6 At2g20810 GAUT10 (GALACTURONOSYLTRANSFERASE 10) C.G. S.X.
0.03 3e-1 36 TaAffx.8887.1.S1_at CA618564 - - 4e+0 At5g41401 unknown protein C.G. S.X.
0.01 1e+0 34 Ta.93.1.S1_at M26672.1 sucrose synthase type 2 - 3e-26 At5g20830 SUS1 (SUCROSE SYNTHASE 1) C.G. S.X.
0.02 1e+0 34 Ta.14341.1.S1_at AL820835 - - 1e-5 At1g68530 KCS6 (3-KETOACYL-COA SYNTHASE 6) C.G. S.X.
0.03 5e+0 32 TaAffx.56443.1.S1_at CA651556 - - 4e+0 At1g10980 - C.G. S.X.
0.03 5e+0 32 TaAffx.107785.1.S1_at CA695338 - - 3e+0 At1g75950 SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1) C.G. S.X.
0.02 5e+0 32 Ta.7285.1.S1_at BJ276616 - - 9e-18 At2g34160 nucleic acid binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e+0 32 Arabidopsis thaliana At4g23170 828416 EP1 Induced in response to Salicylic acid.Similar to receptor-like kinase 4 and 5. NPR1, a known positive regulator of the SA signaling pathway is responsible for the SA-dependent induction and constitutive repression of EP1 gene's basal expression. - - - C.G. S.X.
0.04 2e+0 34 Glycine max GmaAffx.39790.1.S1_at BE211340 - - 4e+0 Atcg00330 - C.G. S.X.
0.56 0 809 Hordeum vulgare Contig12799_at Contig12799 - - 3e-6 At2g20810 GAUT10 (GALACTURONOSYLTRANSFERASE 10) C.G. S.X.
0.32 2e-19 97 Oryza sativa Os03g0413400 BX899056 - Glycosyl transferase, family 8 protein 2e-1 At2g22640 BRK1 (BRICK1) C.G. S.X.
0.04 1e-1 38 Populus trichocarpa PtpAffx.143207.1.A1_at CV242604 glycosyltransferase /// glycosyltransferase - 8e-6 At2g20810 GAUT10 (GALACTURONOSYLTRANSFERASE 10) C.G. S.X.
0.04 2e-2 38 Vitis vinifera 1618645_at CB341965 hypothetical protein LOC100263473 - 3e+0 At4g15953 - C.G. S.X.
0.26 4e-20 97 Zea mays Zm.17090.1.S1_at AW155707 transferase, transferring glycosyl groups - 2e-4 At2g20810 GAUT10 (GALACTURONOSYLTRANSFERASE 10) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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