Gene omics information

Query gene ID	Ta.9196.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.9196.1.S1_x_at	CD919411	-	-	9e-64	At5g08290	YLS8	S.X.	H.G.	Please select
0.83	93.4	Ta.9196.1.S1_at	CD919411	-	-	9e-64	At5g08290	YLS8	S.X.	H.G.	Please select
0.61	82.0	Ta.10799.1.S1_at	BQ800953	-	-	5e-24	At5g15400	U-box domain-containing protein	S.X.	H.G.	Please select
0.60	81.0	Ta.19530.1.A1_at	BJ308204	-	-	3e-1	At1g55950	-	S.X.	H.G.	Please select
0.56	78.6	Ta.1274.1.S1_x_at	CK194462	-	-	3e+0	At1g30070	SGS domain-containing protein	S.X.	H.G.	Please select
0.50	72.4	Ta.19530.2.A1_x_at	CA653085	-	-	3e+0	At2g19730	60S ribosomal protein L28 (RPL28A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.1	99.4	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.2	98.8	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.6	98.3	GSM138215	genotype A77 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.0	98.0	GSM138161	genotype A91 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.3	97.6	GSM138159	genotype F36 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.2	97.5	GSM138173	genotype DH95 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.6	97.0	GSM138148	genotype F29 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.4	96.8	GSM138217	genotype H9 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.2	96.6	GSM138168	genotype B68 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.6	95.6	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.95	0	1318	Ta.9196.1.S1_at	CD919411	-	-	9e-64	At5g08290	YLS8	C.G.	S.X.	Please select
0.44	1e-124	446	Ta.2343.1.S1_x_at	CD879483	-	-	4e-41	At5g08290	YLS8	C.G.	S.X.	Please select
0.28	7e-80	297	Ta.9648.2.S1_at	CD871684	-	-	2e-28	At5g08290	YLS8	C.G.	S.X.	Please select
0.17	1e-38	161	TaAffx.106926.1.S1_at	CA709077	-	-	2e+1	At2g31310	LBD14 (LOB DOMAIN-CONTAINING PROTEIN 14)	C.G.	S.X.	Please select
0.14	2e-30	133	TaAffx.58244.1.S1_at	CA621238	-	-	8e-10	At5g08290	YLS8	C.G.	S.X.	Please select
0.04	3e-5	50	TaAffx.7980.1.S1_at	CA641425	-	-	1e-3	At5g08290	YLS8	C.G.	S.X.	Please select
0.06	5e-4	46	Ta.19986.1.S1_at	CA664007	-	-	1e-3	At5g08290	YLS8	C.G.	S.X.	Please select
0.05	3e-2	40	Ta.4573.1.S1_at	BJ268143	-	-	2e+0	At3g47870	LBD27 (LOB DOMAIN-CONTAINING PROTEIN 27)	C.G.	S.X.	Please select
0.02	2e+0	34	TaAffx.8165.1.S1_at	CA633417	-	-	1e+0	At2g05070	LHCB2.2	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.48	9e-64	244	Arabidopsis thaliana	At5g08290	830725	YLS8	Encodes Dim1 homolog.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.48	6e-81	301	Glycine max	GmaAffx.89382.1.S1_s_at	CK606582	Putative DIM-like protein (DIM)	-	6e-95	At5g08290	YLS8	C.G.	S.X.	Please select
0.71	0	708	Hordeum vulgare	Contig3911_s_at	Contig3911	-	-	4e-56	At5g08290	YLS8	C.G.	S.X.	Please select
0.47	4e-135	482	Oryza sativa	Os10g0486600	AK063786.1	-	Thioredoxin-like protein 4A (Thioredoxin-like U5snRNP protein U5- 15kD) (Spliceosomal U5 snRNP-specific15 kDa protein) (DIM1 protein homolog)	3e-91	At5g08290	YLS8	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.29	7e-53	208	Populus trichocarpa	Ptp.8141.1.S1_s_at	CV250890	hypothetical protein	-	2e-83	At5g08290	YLS8	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.35	3e-76	284	Vitis vinifera	1620025_at	CF372751	hypothetical protein LOC100249310	-	5e-87	At5g08290	YLS8	C.G.	S.X.	Please select
0.46	8e-158	555	Zea mays	Zm.17080.1.A1_at	CF064250	mitosis protein dim1	-	3e-82	At5g08290	YLS8	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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