Gene omics information

Query gene ID	Ta.9135.2.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	82.0	Ta.9135.2.S1_at	BQ172399	-	-	4e+0	At3g25190	nodulin, putative	S.X.	H.G.	Please select
0.38	54.7	Ta.14570.1.S1_at	BJ318968	-	-	6e-1	At5g02780	In2-1 protein, putative	S.X.	H.G.	Please select
0.33	46.9	Ta.1865.2.S1_x_at	CK152141	-	-	2e-2	At2g29125	RTFL2 (ROTUNDIFOLIA LIKE 2)	S.X.	H.G.	Please select
0.32	44.4	Ta.11921.1.S1_at	CA722130	-	-	6e-1	At2g45380	-	S.X.	H.G.	Please select
0.28	39.2	Ta.9628.2.S1_a_at	CD875755	-	-	7e-4	At4g34260	FUC95A	S.X.	H.G.	Please select
0.27	35.6	Ta.23833.4.S1_at	BJ253088	-	-	7e-6	At5g42890	SCP2 (STEROL CARRIER PROTEIN 2)	S.X.	H.G.	Please select
0.27	35.6	Ta.22899.1.S1_at	CK212881	-	-	4e+0	At5g55750	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.26	33.6	Ta.9628.2.S1_at	CD875755	-	-	7e-4	At4g34260	FUC95A	S.X.	H.G.	Please select
0.23	29.0	Ta.6161.3.S1_x_at	CA640525	-	-	1e-12	At5g50870	UBC27 (ubiquitin-conjugating enzyme 27)	S.X.	H.G.	Please select
0.19	22.4	Ta.9344.1.S1_at	CD917189	-	-	1e-12	At1g27440	GUT2	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.2	97.5	GSM138201	genotype F48 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.0	97.4	GSM111230	genotype B33 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.7	97.1	GSM138167	genotype G30 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.5	96.9	GSM138192	genotype B33 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.4	96.8	GSM138211	genotype B65 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.2	96.6	GSM138193	genotype B33 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.8	96.0	GSM138204	genotype H8 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.5	95.4	GSM138175	genotype A81 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.5	95.4	GSM138200	genotype F48 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4	95.2	GSM138144	Genotype RL4452 developing seed at 5 days after anthesis, biological rep1 location SB	GSE5937	Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.40	2e-171	601	Ta.9135.1.S1_x_at	CK215975	-	-	2e-1	At3g03080	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.40	2e-171	601	Ta.9135.1.S1_at	CK215975	-	-	2e-1	At3g03080	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.25	5e-52	204	Ta.27653.2.S1_a_at	CA735863	-	-	1e+0	At4g03175	protein kinase family protein	C.G.	S.X.	Please select
0.35	1e-27	123	TaAffx.98909.1.A1_at	CK211361	-	-	2e+0	At5g16960	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.35	1e-27	123	TaAffx.98909.1.A1_s_at	CK211361	-	-	2e+0	At5g16960	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.07	2e-5	50	Ta.15711.1.S1_at	CA486439	-	-	6e-2	At3g03080	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.04	3e-4	46	Ta.1695.2.A1_at	CA639868	-	-	1e+0	At1g72750	ATTIM23-2	C.G.	S.X.	Please select
0.04	3e-4	46	Ta.1695.1.A1_at	CK212367	-	-	4e-1	At1g73560	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.04	3e-4	46	Ta.1695.2.A1_x_at	CA639868	-	-	1e+0	At1g72750	ATTIM23-2	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e+0	32	Arabidopsis thaliana	At3g25190	822112	nodulin, putative	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPFA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e+0	32	Glycine max	PsAffx.C73000056_at	PsAffx.C73000056	-	-	2e+1	At5g13910	LEP (LEAFY PETIOLE)	C.G.	S.X.	Please select
0.62	2e-68	258	Hordeum vulgare	HY10H16u_x_at	HY10H16u	-	-	3e+0	At5g44500	small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative	C.G.	S.X.	Please select
0.15	5e-13	75	Oryza sativa	Os04g0497000	AK109382.2	-	(+)-pulegone reductase	5e-5	At3g03080	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	3e-1	36	Populus trichocarpa	PtpAffx.216823.1.S1_at	pmrna31859	hypothetical protein	-	5e+0	At5g50660	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e+0	30	Vitis vinifera	1609249_at	CB983150	-	-	6e+0	At5g59305	unknown protein	C.G.	S.X.	Please select
0.26	7e-40	163	Zea mays	Zm.3560.1.S1_at	AI987350	NADP-dependent oxidoreductase P1	-	3e+0	At2g40170	GEA6 (LATE EMBRYOGENESIS ABUNDANT 6)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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