Gene omics information

Query gene ID	Ta.9126.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	88.0	Ta.9126.1.A1_at	BJ323019	-	-	3e-1	At4g18501	unknown protein	S.X.	H.G.	Please select
0.67	86.3	Ta.11569.1.A1_at	BQ170374	-	-	7e-2	At3g43153	cAMP-dependent protein kinase inhibitor-related	S.X.	H.G.	Please select
0.67	86.3	Ta.25949.1.S1_a_at	CD454725	-	-	6e+0	At5g52830	WRKY27	S.X.	H.G.	Please select
0.55	76.8	Ta.11654.1.S1_at	BQ170534	-	-	1e+0	At1g60970	clathrin adaptor complex small chain family protein	S.X.	H.G.	Please select
0.50	72.4	Ta.13215.1.S1_x_at	BQ166443	-	-	5e+0	At4g10870	unknown protein	S.X.	H.G.	Please select
0.43	62.2	TaAffx.39988.1.A1_at	BJ275531	-	-	4e+0	At5g52740	heavy-metal-associated domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.4	98.9	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.2	98.8	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.0	98.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.4	98.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.9	98.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.5	97.8	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM324491	Si+ B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.4	95.2	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.2	94.8	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.41	2e-92	339	Ta.8234.3.S1_x_at	BM137388	-	-	4e+0	At2g28405	LCR32 (Low-molecular-weight cysteine-rich 32)	C.G.	S.X.	Please select
0.37	4e-84	311	Ta.8234.2.S1_x_at	CD904399	-	-	5e+0	At3g52540	OFP18 (OVATE FAMILY PROTEIN 18)	C.G.	S.X.	Please select
0.31	9e-73	274	Ta.8192.1.A1_at	BQ161573	-	-	2e+0	At1g69600	ZFHD1 (ZINC FINGER HOMEODOMAIN 1)	C.G.	S.X.	Please select
0.26	3e-63	242	Ta.1957.1.S1_at	BE471222	-	-	4e+0	At5g11740	AGP15 (ARABINOGALACTAN PROTEIN 15)	C.G.	S.X.	Please select
0.37	1e-50	200	Ta.5023.1.A1_at	BJ275559	-	-	3e-1	At2g27510	ATFD3 (ferredoxin 3)	C.G.	S.X.	Please select
0.20	8e-27	121	Ta.11163.1.A1_at	BQ169537	-	-	1e+0	At5g50423	-	C.G.	S.X.	Please select
0.11	4e-16	85	Ta.20481.1.A1_at	CA614346	-	-	2e-2	At3g53580	diaminopimelate epimerase family protein	C.G.	S.X.	Please select
0.18	7e-12	71	Ta.5023.2.A1_at	BJ311223	-	-	1e+0	At5g05090	myb family transcription factor	C.G.	S.X.	Please select
0.07	2e-5	50	TaAffx.32701.3.S1_at	CA643293	-	-	4e+0	At2g28405	LCR32 (Low-molecular-weight cysteine-rich 32)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e-1	36	Arabidopsis thaliana	At4g18501	3770110	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	GmaAffx.46587.1.S1_at	BM891309	-	-	8e-1	At5g04120	phosphoglycerate/bisphosphoglycerate mutase family protein	C.G.	S.X.	Please select
0.07	2e-16	85	Hordeum vulgare	Contig10079_at	Contig10079	-	-	3e-18	At3g53580	diaminopimelate epimerase family protein	C.G.	S.X.	Please select
0.15	1e-14	81	Oryza sativa	Os03g0174200	AK103762.1	-	Hypothetical protein	1e-2	At3g11820	SYP121 (SYNTAXIN OF PLANTS 121)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	8e+0	32	Populus trichocarpa	PtpAffx.9921.5.A1_a_at	DN485568	hypothetical protein	-	3e+0	At1g65113	SCRL2 (SCR-Like 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e+0	32	Vitis vinifera	1620092_at	CB340912	hypothetical LOC100246138	-	2e-1	At2g25000	WRKY60	C.G.	S.X.	Please select
0.12	4e-8	57	Zea mays	Zm.5583.1.A1_at	AI629453	-	-	1e+0	At5g66400	RAB18 (RESPONSIVE TO ABA 18)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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