CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.9117.1.A1_a_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 90.8 Ta.9117.1.A1_a_at BJ216810 - - 2e+0 At1g51010 unknown protein S.X. H.G.
0.55 76.8 Ta.9117.3.A1_x_at BJ230809 - - 4e-3 At5g49700 DNA-binding protein-related S.X. H.G.
0.40 58.4 Ta.29457.1.S1_at CK205969 - - 1e-18 At4g30020 subtilase family protein S.X. H.G.
0.40 58.4 Ta.9117.1.A1_at BJ216810 - - 2e+0 At1g51010 unknown protein S.X. H.G.
0.10 11.3 Ta.29552.1.S1_x_at BE446813 - - 6e-1 At1g18650 PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3) S.X. H.G.
0.04 5.8 TaAffx.33515.1.A1_at BJ257051 - - 4e-1 At3g52380 CP33 S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.0 98.5 GSM314251 tissue type: germinating seed, coleoptile - rep1 GSE12508 Transcription patterns during wheat development
6.6 98.3 GSM314252 tissue type: germinating seed, coleoptile - rep2 GSE12508 Transcription patterns during wheat development
6.3 98.2 GSM298061 Crown tissue of Harnesk at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
5.4 97.7 GSM298062 Crown tissue of Harnesk at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
5.0 97.4 GSM298059 Crown tissue of Harnesk at 3 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
4.6 97.0 GSM314253 tissue type: germinating seed, coleoptile - rep3 GSE12508 Transcription patterns during wheat development
4.6 97.0 GSM298072 Crown tissue of Paragon at 3 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
4.5 96.9 GSM298060 Crown tissue of Harnesk at 3 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
4.3 96.7 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
4.2 96.6 GSM298071 Crown tissue of Paragon at 3 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.96 0 1729 Ta.9117.1.A1_at BJ216810 - - 2e+0 At1g51010 unknown protein C.G. S.X.
0.57 5e-118 424 Ta.9117.3.A1_x_at BJ230809 - - 4e-3 At5g49700 DNA-binding protein-related C.G. S.X.
0.02 5e-1 36 Ta.2983.1.S1_a_at CA500420 - - 3e+0 At3g17470 RelA/SpoT domain-containing protein / calcium-binding EF-hand family protein C.G. S.X.
0.02 2e+0 34 TaAffx.110716.1.S1_at CA655473 - - 2e-2 At5g60390 elongation factor 1-alpha / EF-1-alpha C.G. S.X.
0.01 2e+0 34 Ta.659.5.S1_at CD878955 - - 0 At1g07920 elongation factor 1-alpha / EF-1-alpha C.G. S.X.
0.01 2e+0 34 Ta.659.3.S1_x_at CD878859 Translation elongation factor 1 alpha-subunit - 0 At1g07920 elongation factor 1-alpha / EF-1-alpha C.G. S.X.
0.01 2e+0 34 Ta.659.1.S1_x_at BI751166 Translation elongation factor 1 alpha-subunit - 0 At1g07920 elongation factor 1-alpha / EF-1-alpha C.G. S.X.
0.01 2e+0 34 Ta.659.1.S1_at BI751166 Translation elongation factor 1 alpha-subunit - 0 At1g07920 elongation factor 1-alpha / EF-1-alpha C.G. S.X.
0.03 2e+0 34 Ta.23115.3.S1_a_at CA640124 - - 1e-6 At3g17810 dihydroorotate dehydrogenase family protein / dihydroorotate oxidase family protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At1g51010 841523 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMPAFV - - - C.G. S.X.
0.02 7e-1 36 Glycine max Gma.15796.1.A1_at BI972938 bZIP transcription factor bZIP115 /// bZIP transcription factor bZIP117 - 9e-2 At4g36730 GBF1 C.G. S.X.
0.63 0 1080 Hordeum vulgare Contig7510_at Contig7510 - - 9e-1 At4g02340 epoxide hydrolase, putative C.G. S.X.
0.38 7e-85 315 Oryza sativa Os09g0498800 AK070571.1 - Hypothetical plant protein family protein 6e-2 At1g51630 unknown protein C.G. S.X.
0.03 3e+0 34 Populus trichocarpa PtpAffx.10101.1.A1_at BP933543 hypothetical protein - 1e+0 At1g18265 unknown protein C.G. S.X.
0.02 6e-1 34 Vitis vinifera 1619148_at CF513297 hypothetical protein LOC100263958 - 6e-2 At3g12130 KH domain-containing protein / zinc finger (CCCH type) family protein C.G. S.X.
0.45 8e-41 167 Zea mays Zm.12573.2.A1_at AY109025.1 hypothetical protein LOC100192765 - 9e+0 At5g15600 SP1L4 (SPIRAL1-LIKE4) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage