Gene omics information

Query gene ID	Ta.8988.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.40	58.4	Ta.8988.1.S1_at	BQ162735	-	-	4e+0	At5g41810	unknown protein	S.X.	H.G.	Please select
0.83	93.4	TaAffx.110147.1.S1_at	BG905569	-	-	1e+1	At4g37409	unknown protein	S.X.	H.G.	Please select
0.73	89.1	Ta.5437.1.S1_at	CK204523	-	-	4e-5	At5g23750	remorin family protein	S.X.	H.G.	Please select
0.47	67.9	Ta.303.1.S1_x_at	BG906281	-	-	3e+0	At3g28590	unknown protein	S.X.	H.G.	Please select
0.40	58.4	Ta.5437.3.S1_a_at	CA677043	-	-	8e-1	At1g37140	MCT1 (mei2 C-Terminal RRM only like 1)	S.X.	H.G.	Please select
0.36	51.9	Ta.21345.1.A1_x_at	CA718360	-	-	2e+1	At5g26330	plastocyanin-like domain-containing protein / mavicyanin, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
31.9	99.9	GSM298077	Leaf tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
26.0	99.8	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
17.5	99.7	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
17.4	99.6	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
16.8	99.6	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
16.2	99.6	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
12.8	99.4	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
11.6	99.3	GSM298058	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
11.0	99.3	GSM298053	Leaf tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
10.8	99.2	GSM298065	Leaf tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.31	1e-40	167	Ta.8988.2.S1_at	CA622279	-	-	7e-5	At3g51480	ATGLR3.6 (GLUTAMATE RECEPTOR 3.6)	C.G.	S.X.	Please select
0.31	1e-40	167	Ta.8988.2.S1_x_at	CA622279	-	-	7e-5	At3g51480	ATGLR3.6 (GLUTAMATE RECEPTOR 3.6)	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.107077.1.S1_at	CA706546	-	-	1e+1	At5g05020	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	36	Ta.27028.1.S1_at	BT008913.1	-	-	2e+1	At5g64160	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.13038.1.S1_at	BJ209529	-	-	2e-2	At2g43910	thiol methyltransferase, putative	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.113185.1.S1_s_at	CA618922	-	-	1e+0	At5g11990	proline-rich family protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.98797.2.S1_at	CA610762	-	-	3e+0	At4g27360	dynein light chain, putative	C.G.	S.X.	Please select
0.04	4e+0	32	TaAffx.52953.1.S1_at	CA698509	-	-	1e+0	At5g55550	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.31900.1.S1_at	CA605458	-	-	3e-13	At2g42490	copper amine oxidase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e+0	32	Arabidopsis thaliana	At5g41810	834186	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e-1	36	Glycine max	PsAffx.C14000076_at	PsAffx.C14000076	-	-	3e-1	At1g05420	OFP12 (OVATE FAMILY PROTEIN 12)	C.G.	S.X.	Please select
0.04	1e-1	36	Hordeum vulgare	Contig25984_at	Contig25984	-	-	9e-1	At4g24380	unknown protein	C.G.	S.X.	Please select
0.04	5e-1	36	Oryza sativa	Os08g0215500	9636.m01130	-	-	7e+0	At5g63400	ADK1 (ADENYLATE KINASE 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	3e-1	36	Populus trichocarpa	PtpAffx.214972.1.S1_at	pmrna28907	hypothetical protein	-	1e+1	At5g10330	HPA1 (HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	32	Vitis vinifera	1612041_at	CB347810	-	-	5e-11	At3g60540	sec61beta family protein	C.G.	S.X.	Please select
0.03	4e-1	34	Zea mays	Zm.4618.1.A1_at	AW066311	pre-mRNA-splicing factor ISY1	-	4e-7	At3g18790	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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