Gene omics information

Query gene ID	Ta.8841.2.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.76	90.1	Ta.8841.2.S1_a_at	CA640387	-	-	3e-1	At3g12250	TGA6 (TGACG MOTIF-BINDING FACTOR 6)	S.X.	H.G.	Please select
0.88	94.4	TaAffx.63920.1.A1_at	BQ162587	-	-	2e+0	At2g02880	mucin-related	S.X.	H.G.	Please select
0.88	94.4	TaAffx.63920.1.A1_x_at	BQ162587	-	-	2e+0	At2g02880	mucin-related	S.X.	H.G.	Please select
0.75	89.8	Ta.8896.2.S1_a_at	CA639810	-	-	1e-1	At1g15970	methyladenine glycosylase family protein	S.X.	H.G.	Please select
0.70	87.2	Ta.25946.1.A1_at	CD454681	-	-	5e+0	At5g44585	unknown protein	S.X.	H.G.	Please select
0.67	86.3	Ta.8896.1.S1_x_at	CK153405	-	-	1e-1	At1g15970	methyladenine glycosylase family protein	S.X.	H.G.	Please select
0.63	83.1	Ta.8896.2.S1_x_at	CA639810	-	-	1e-1	At1g15970	methyladenine glycosylase family protein	S.X.	H.G.	Please select
0.59	79.8	Ta.9494.1.S1_a_at	CK199730	-	-	1e-8	At1g53580	GLY3 (GLYOXALASE II 3)	S.X.	H.G.	Please select
0.42	60.9	Ta.4779.1.S1_at	BJ271542	-	-	9e-1	At5g20920	EIF2 BETA	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
44.4	99.9	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
43.6	99.9	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
43.1	99.9	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
30.5	99.9	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
27.3	99.8	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
12.8	99.4	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
10.7	99.2	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development
9.4	99.1	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
7.5	98.6	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
7.2	98.5	GSM314263	tissue type: seedling, crown - rep1	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	2e-5	50	TaAffx.24919.1.S1_at	BJ293166	-	-	1e-3	At2g30590	WRKY21	C.G.	S.X.	Please select
0.04	2e-2	40	Ta.19555.3.S1_at	CA648950	-	-	9e-23	At1g80230	cytochrome c oxidase family protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.23031.1.S1_at	CA741576	-	-	4e-3	At5g61590	AP2 domain-containing transcription factor family protein	C.G.	S.X.	Please select
0.02	1e+0	34	TaAffx.14828.1.S1_at	CK208264	-	-	7e+0	At5g44170	-	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.117156.2.S1_x_at	BQ609222	-	-	1e+0	At1g60730	aldo/keto reductase family protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.117156.2.S1_at	BQ609222	-	-	1e+0	At1g60730	aldo/keto reductase family protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.108760.2.S1_at	CA655402	-	-	4e+0	At4g16140	proline-rich family protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.108760.2.S1_x_at	CA655402	-	-	4e+0	At4g16140	proline-rich family protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.4964.1.A1_at	BJ220935	-	-	1e-10	At3g12390	nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e-1	36	Arabidopsis thaliana	At3g12250	820405	TGA6 (TGACG MOTIF-BINDING FACTOR 6)	basic leucine zipper transcription factor involved in the activation of SA-responsive genes.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	2e+0	34	Glycine max	Gma.6642.1.A1_at	BE610052	transcription factor bZIP42	-	1e-10	At1g08320	bZIP family transcription factor	C.G.	S.X.	Please select
0.38	2e-170	597	Hordeum vulgare	Contig16432_at	Contig16432	-	-	1e-2	At3g12250	TGA6 (TGACG MOTIF-BINDING FACTOR 6)	C.G.	S.X.	Please select
0.22	2e-53	210	Oryza sativa	Os11g0152700	AK102690.1	-	Transcription factor HBP-1b(C38) (Fragment)	3e-1	At1g77920	bZIP family transcription factor	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	6e-6	52	Populus trichocarpa	PtpAffx.204392.1.S1_at	pmrna8622	hypothetical protein	-	3e-12	At1g08320	bZIP family transcription factor	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	32	Vitis vinifera	1612520_at	CF608548	hypothetical protein LOC100262310	-	2e-14	At4g34412	-	C.G.	S.X.	Please select
0.05	8e-12	69	Zea mays	Zm.16855.1.A1_at	AF036949.1	liguleless2	-	1e-3	At5g06950	AHBP-1B	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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