CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.8784.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.93 98.7 Ta.8784.1.S1_at CD452671 - - 3e+0 At3g19430 late embryogenesis abundant protein-related / LEA protein-related S.X. H.G.
0.93 98.7 Ta.16296.1.S1_at CA604223 - - 9e+0 At5g07560 GRP20 (GLYCINE-RICH PROTEIN 20) S.X. H.G.
0.89 94.6 Ta.29418.1.A1_at BJ283945 - - 1e+0 At5g14180 MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1) S.X. H.G.
0.86 94.1 Ta.216.1.S1_at U91981.1 pollen allergen homolog - 6e-1 At3g49630 2-oxoacid-dependent oxidase, putative S.X. H.G.
0.85 93.8 Ta.22770.1.S1_at CK200775 - - 2e+0 At5g13050 5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) S.X. H.G.
0.83 93.4 TaAffx.8213.1.S1_at CA631501 - - 8e-1 At1g68530 KCS6 (3-KETOACYL-COA SYNTHASE 6) S.X. H.G.
0.71 88.0 Ta.16942.1.S1_a_at CA615566 - - 4e+0 At1g05136 unknown protein S.X. H.G.
0.65 83.9 Ta.13142.1.S1_at CK193060 - - 1e-2 At5g27690 heavy-metal-associated domain-containing protein S.X. H.G.
0.65 83.9 Ta.9275.1.S1_x_at BJ283868 - - 1e-3 At4g12490 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein S.X. H.G.
0.63 83.1 Ta.8869.1.S1_at BQ162539 - - 9e-1 At2g04864 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
125.4 100.0 GSM314254 tissue type: germinating seed, root - rep1 GSE12508 Transcription patterns during wheat development
87.7 100.0 GSM314256 tissue type: germinating seed, root - rep3 GSE12508 Transcription patterns during wheat development
40.0 99.9 GSM314255 tissue type: germinating seed, root - rep2 GSE12508 Transcription patterns during wheat development
39.6 99.9 GSM314262 tissue type: seedling, root - rep3 GSE12508 Transcription patterns during wheat development
27.7 99.8 GSM314261 tissue type: seedling, root - rep2 GSE12508 Transcription patterns during wheat development
24.0 99.8 GSM314260 tissue type: seedling, root - rep1 GSE12508 Transcription patterns during wheat development
11.8 99.3 GSM314258 tissue type: germinating seed, embryo - rep2 GSE12508 Transcription patterns during wheat development
5.2 97.5 GSM314259 tissue type: germinating seed, embryo - rep3 GSE12508 Transcription patterns during wheat development
4.5 96.9 GSM314257 tissue type: germinating seed, embryo - rep1 GSE12508 Transcription patterns during wheat development
1.0 76.2 GSM315202 target strand labeled: Sense - rep1 GSE12528 Wheat "Chinese Spring" natural antisense transcription survey
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 4e-2 40 TaAffx.59075.1.S1_at CA643823 - - 2e-1 At4g29650 cytidine deaminase 4 (CDA4) (desH) / cytidine aminohydrolase C.G. S.X.
0.07 4e-2 40 Ta.26169.1.A1_at CD452458 - - 1e+0 At1g78170 unknown protein C.G. S.X.
0.02 2e-1 38 TaAffx.105835.1.S1_at CA729204 - - 3e-4 At4g16240 unknown protein C.G. S.X.
0.01 2e-1 38 Ta.27161.1.S1_at CK161726 - - 5e-4 At3g59380 FTA (FARNESYLTRANSFERASE A) C.G. S.X.
0.02 2e-1 38 Ta.13044.1.A1_at CD491369 - - 2e+0 At2g39790 mitochondrial glycoprotein family protein / MAM33 family protein C.G. S.X.
0.02 7e-1 36 TaAffx.111919.1.S1_at CA630402 - - 2e+1 At5g47700 60S acidic ribosomal protein P1 (RPP1C) C.G. S.X.
0.02 7e-1 36 Ta.9648.3.S1_at CA611230 - - 3e-1 At5g08130 BIM1 C.G. S.X.
0.01 7e-1 36 Ta.9421.1.S1_at CA620843 basic region/leucine zipper protein - 3e-3 At2g18162 CPuORF1 (Conserved peptide upstream open reading frame 1) C.G. S.X.
0.01 7e-1 36 Ta.6518.1.S1_at BJ307082 - - 2e-5 At4g38900 bZIP protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e+0 34 Arabidopsis thaliana At3g19430 821477 late embryogenesis abundant protein-related / LEA protein-related F:structural constituent of cell wall;P:unknown;C:unknown;MBOFPVA - - - C.G. S.X.
0.03 6e-2 40 Glycine max PsAffx.CL1410Contig1_at PsAffx.CL1410Contig1 - - 8e+0 At5g42785 unknown protein C.G. S.X.
0.43 2e-73 276 Hordeum vulgare Contig21025_at Contig21025 - - 7e-2 At2g16340 unknown protein C.G. S.X.
0.46 2e-98 361 Oryza sativa Os01g0968200 NM_189425.1 - Root cap family protein 2e+0 At3g19430 late embryogenesis abundant protein-related / LEA protein-related C.G. S.X.
0.03 4e-3 44 Populus trichocarpa PtpAffx.204686.1.S1_at pmrna9231 hypothetical protein - 2e-18 At3g19430 late embryogenesis abundant protein-related / LEA protein-related C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1618037_at CB911958 - - 3e-1 At3g01650 RGLG1 (RING domain Ligase1) C.G. S.X.
0.31 5e-83 307 Zea mays Zm.52.1.A1_at AB021175.1 root cap protein 1 - 2e+0 At5g60520 late embryogenesis abundant protein-related / LEA protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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