Gene omics information

Query gene ID	Ta.8708.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.2	Ta.8708.1.A1_at	BQ162257	-	-	3e+0	At2g14692	unknown protein	S.X.	H.G.	Please select
0.80	92.2	Ta.11969.1.A1_a_at	CK208221	-	-	5e+0	At5g58500	LSH5 (LIGHT SENSITIVE HYPOCOTYLS 5)	S.X.	H.G.	Please select
0.80	92.2	Ta.7477.1.S1_at	CK209166	-	-	2e+0	At1g38630	unknown protein	S.X.	H.G.	Please select
0.67	86.3	Ta.10234.1.A1_at	CD910254	-	-	2e+0	At2g15710	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	S.X.	H.G.	Please select
0.44	64.5	Ta.30570.1.A1_at	BJ263950	-	-	4e+0	At5g20150	SPX1 (SPX DOMAIN GENE 1)	S.X.	H.G.	Please select
0.29	39.2	Ta.5081.1.A1_at	BJ271506	-	-	1e+0	At5g50740	metal ion binding	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
13.7	99.5	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.2	99.3	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.4	99.1	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.1	99.0	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.9	99.0	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.8	98.7	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.7	98.7	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.5	98.6	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.4	98.6	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.3	98.6	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	5e-24	111	Ta.3619.1.S1_at	BQ161593	-	-	6e-8	At5g66680	DGL1	C.G.	S.X.	Please select
0.14	3e-16	85	Ta.3619.2.S1_at	CA648470	-	-	2e-2	At5g66680	DGL1	C.G.	S.X.	Please select
0.16	9e-7	54	Ta.22094.1.S1_at	CA721628	-	-	1e-1	At5g64470	unknown protein	C.G.	S.X.	Please select
0.14	1e-5	50	Ta.1310.1.S1_x_at	BJ282404	translationally controlled tumor protein	-	1e-10	At3g16640	TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)	C.G.	S.X.	Please select
0.04	2e-1	36	TaAffx.113891.2.S1_at	CA642658	-	-	7e-2	At4g23260	ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	C.G.	S.X.	Please select
0.04	2e-1	36	TaAffx.113891.2.S1_s_at	CA642658	-	-	7e-2	At4g23260	ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	C.G.	S.X.	Please select
0.02	9e-1	34	TaAffx.7419.1.A1_x_at	CK216646	-	-	2e+0	At5g18690	AGP25 (ARABINOGALACTAN PROTEINS 25)	C.G.	S.X.	Please select
0.04	9e-1	34	Ta.27795.1.S1_at	CA736709	-	-	7e-1	At3g55430	glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative	C.G.	S.X.	Please select
0.03	9e-1	34	Ta.22295.1.A1_at	CA705949	-	-	1e+0	At2g37000	TCP family transcription factor, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	3e+0	32	Arabidopsis thaliana	At2g14692	6240749	unknown protein	F:unknown;P:unknown;C:unknown	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	Gma.5847.2.A1_at	AW349427	-	-	3e+0	At3g06460	GNS1/SUR4 membrane family protein	C.G.	S.X.	Please select
0.13	3e-8	57	Hordeum vulgare	Contig97_s_at	Contig97	translationally-controlled tumor protein homolog	-	2e-8	At3g16640	TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)	C.G.	S.X.	Please select
0.09	7e-3	42	Oryza sativa	Os11g0660500	D12626.1	-	Translationally controlled tumor protein familyprotein	2e-13	At3g16640	TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	2e-2	40	Populus trichocarpa	PtpAffx.147169.1.A1_at	CV247683	hypothetical protein	-	2e+0	At3g16640	TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	1e+0	32	Vitis vinifera	1620798_s_at	BQ800340	hypothetical protein LOC100251175	-	1e-5	At3g16640	TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)	C.G.	S.X.	Please select
0.04	1e-10	65	Zea mays	Zm.13027.1.A1_a_at	CA403644	hypothetical protein LOC100191802	-	2e-11	At5g66680	DGL1	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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