Gene omics information

Query gene ID	Ta.8679.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.8679.1.S1_x_at	CK157404	-	-	1e-9	At1g62740	stress-inducible protein, putative	S.X.	H.G.	Please select
0.50	72.4	Ta.19530.2.A1_x_at	CA653085	-	-	3e+0	At2g19730	60S ribosomal protein L28 (RPL28A)	S.X.	H.G.	Please select
0.46	66.8	Ta.19530.1.A1_at	BJ308204	-	-	3e-1	At1g55950	-	S.X.	H.G.	Please select
0.40	58.4	Ta.8343.3.S1_a_at	CA682617	-	-	1e-6	At3g07770	ATP binding	S.X.	H.G.	Please select
0.33	46.9	Ta.8343.1.S1_a_at	CA704658	-	-	1e-12	At3g07770	ATP binding	S.X.	H.G.	Please select
0.08	9.4	Ta.2538.1.S1_at	BJ215860	-	-	4e-62	At5g07340	calnexin, putative	S.X.	H.G.	Please select
0.08	9.4	Ta.22317.1.S1_s_at	CD892646	calreticulin-like protein	-	2e-85	At1g56340	CRT1 (CALRETICULIN 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.1	98.5	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.5	96.9	GSM138215	genotype A77 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.3	96.7	GSM138184	genotype C25 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.7	95.8	GSM111187	genotype B68 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.6	95.6	GSM138217	genotype H9 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.3	95.0	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.2	94.8	GSM138157	genotype DH91 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.2	94.8	GSM138197	genotype F82 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.9	94.0	GSM138161	genotype A91 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.9	94.0	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.21	3e-78	293	Ta.8679.2.S1_at	CA681251	-	-	2e-5	At1g12270	stress-inducible protein, putative	C.G.	S.X.	Please select
0.23	3e-41	171	TaAffx.58033.1.S1_at	CA622958	-	-	4e-22	At4g12400	stress-inducible protein, putative	C.G.	S.X.	Please select
0.02	3e-4	48	TaAffx.28947.1.S1_at	CA653822	-	-	4e-3	At2g24060	translation initiation factor 3 (IF-3) family protein	C.G.	S.X.	Please select
0.06	1e-3	46	TaAffx.23303.1.S1_at	CA736876	-	-	1e-2	At4g12400	stress-inducible protein, putative	C.G.	S.X.	Please select
0.02	6e-2	40	TaAffx.87050.1.S1_x_at	CA596709	-	-	3e-1	At1g75190	unknown protein	C.G.	S.X.	Please select
0.02	6e-2	40	TaAffx.87050.1.S1_at	CA596709	-	-	3e-1	At1g75190	unknown protein	C.G.	S.X.	Please select
0.02	6e-2	40	TaAffx.38188.2.S1_at	BJ245956	-	-	4e+0	At5g26890	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	36	Ta.9549.3.S1_x_at	BJ229242	-	-	1e+0	At5g40570	surfeit locus protein 2 family protein / SURF2 family protein	C.G.	S.X.	Please select
0.01	1e+0	36	Ta.3753.1.S1_at	BJ247323	-	-	2e+1	At5g65220	ribosomal protein L29 family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	1e-9	65	Arabidopsis thaliana	At1g62740	842572	stress-inducible protein, putative	F:binding;P:response to stress;C:cytosol, nucleus, plasma membrane;OBMPFAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.25	2e-21	105	Glycine max	Gma.8435.1.S1_at	X79770.1	stress inducible protein	-	1e-61	At1g62740	stress-inducible protein, putative	C.G.	S.X.	Please select
0.74	0	2107	Hordeum vulgare	Contig3357_at	Contig3357	-	-	1e-15	At1g62740	stress-inducible protein, putative	C.G.	S.X.	Please select
0.53	0	971	Oryza sativa	Os02g0644100	AK102431.1	-	Heat shock protein STI (Stress inducible protein)(GmSTI)	6e-33	At1g62740	stress-inducible protein, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.25	2e-18	95	Populus trichocarpa	PtpAffx.215660.1.S1_s_at	pmrna29980	hypothetical protein	-	1e-64	At4g12400	stress-inducible protein, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.16	6e-30	131	Vitis vinifera	1618545_a_at	CB346750	hypothetical LOC100265979	-	2e-50	At1g12270	stress-inducible protein, putative	C.G.	S.X.	Please select
0.51	5e-124	444	Zea mays	Zm.2497.1.S1_at	AY107480.1	hypothetical protein LOC100272917	-	3e-55	At4g12400	stress-inducible protein, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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