CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.8631.2.S1_a_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.48 69.0 Ta.8631.2.S1_a_at CA635564 - - 5e-9 At3g49870 ATARLA1C (ADP-ribosylation factor-like A1C) S.X. H.G.
0.61 82.0 TaAffx.106271.1.S1_x_at CA720946 - - 9e-1 At1g63030 ddf2 (DWARF AND DELAYED FLOWERING 2) S.X. H.G.
0.60 81.0 TaAffx.106271.1.S1_at CA720946 - - 9e-1 At1g63030 ddf2 (DWARF AND DELAYED FLOWERING 2) S.X. H.G.
0.50 72.4 Ta.10193.3.S1_a_at CA610886 - - 2e-8 At4g35830 aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO) S.X. H.G.
0.31 42.7 Ta.29714.2.S1_at CA608421 - - 4e+0 At4g32580 thioredoxin family protein S.X. H.G.
0.27 35.6 Ta.17648.1.S1_s_at CA623067 - - 4e-20 At2g46700 calcium-dependent protein kinase, putative / CDPK, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
25.5 99.8 GSM314280 tissue type: anthers, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
22.5 99.8 GSM314279 tissue type: anthers, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
19.4 99.7 GSM314278 tissue type: anthers, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
5.0 97.4 GSM314261 tissue type: seedling, root - rep2 GSE12508 Transcription patterns during wheat development
4.7 97.1 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1 96.4 GSM343688 Wheat var. Kennedy_Fp inoculated_rep3 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.0 96.3 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
3.6 95.6 GSM343682 Wheat var. Kennedy_control_rep2 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.6 95.6 GSM314262 tissue type: seedling, root - rep3 GSE12508 Transcription patterns during wheat development
3.2 94.8 GSM343678 Wheat var. Kennedy_control_rep1 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.89 0 825 Ta.8631.2.S1_x_at CA635564 - - 5e-9 At3g49870 ATARLA1C (ADP-ribosylation factor-like A1C) C.G. S.X.
0.43 6e-104 377 Ta.8631.1.S1_at CA690636 - - 8e-28 At5g67560 ATARLA1D (ADP-ribosylation factor-like A1D) C.G. S.X.
0.04 2e-2 40 TaAffx.114104.1.S1_at CA598665 - - 3e+0 At5g42905 nucleic acid binding / ribonuclease H C.G. S.X.
0.03 7e-2 38 TaAffx.130052.1.S1_at CK214194 - - 6e+0 At5g35230 unknown protein C.G. S.X.
0.03 1e+0 34 TaAffx.56934.1.S1_at CA639960 - - 4e+0 At2g17695 unknown protein C.G. S.X.
0.04 1e+0 34 TaAffx.30736.1.S1_at CA622540 - - 2e-6 At2g40300 ATFER4 (ferritin 4) C.G. S.X.
0.03 1e+0 34 TaAffx.105444.1.S1_at CA734222 - - 1e+0 At4g00220 JLO (JAGGED LATERAL ORGANS) C.G. S.X.
0.01 1e+0 34 Ta.26984.1.S1_at CK192956 - - 3e+0 At2g40765 unknown protein C.G. S.X.
0.03 4e+0 32 TaAffx.82001.1.S1_at CA679135 - - 7e-2 At5g47700 60S acidic ribosomal protein P1 (RPP1C) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.22 5e-9 61 Arabidopsis thaliana At3g49870 824149 ATARLA1C (ADP-ribosylation factor-like A1C) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. - - - C.G. S.X.
0.27 8e-18 91 Glycine max Gma.7813.2.S1_at BE660328 - - 6e-76 At3g49870 ATARLA1C (ADP-ribosylation factor-like A1C) C.G. S.X.
0.47 3e-98 357 Hordeum vulgare Contig9224_at Contig9224 - - 1e-38 At3g49870 ATARLA1C (ADP-ribosylation factor-like A1C) C.G. S.X.
0.22 1e-48 194 Oryza sativa Os03g0200800 AK112007.1 - - 5e-35 At3g49870 ATARLA1C (ADP-ribosylation factor-like A1C) C.G. S.X.
0.19 3e-17 89 Populus trichocarpa Ptp.625.1.S1_at CK087324 hypothetical protein - 4e-60 At3g49870 ATARLA1C (ADP-ribosylation factor-like A1C) C.G. S.X.
0.19 4e-22 103 Vitis vinifera 1619019_at CF213490 hypothetical protein LOC100243336 - 2e-102 At5g67560 ATARLA1D (ADP-ribosylation factor-like A1D) C.G. S.X.
0.15 6e-16 83 Zea mays Zm.14791.1.A1_at CF628382 ADP-ribosylation factor-like protein 8B - 7e-9 At5g67560 ATARLA1D (ADP-ribosylation factor-like A1D) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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