Gene omics information

Query gene ID Ta.8579.1.A1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6786.3Ta.8579.1.A1_atBQ162082--4e-4At2g45040matrix metalloproteinaseS.X.H.G.
0.6081.0Ta.20562.1.S1_atBQ743969--6e+0At5g4004060S acidic ribosomal protein P2 (RPP2E)S.X.H.G.
0.5879.2Ta.4674.1.S1_s_atBJ269896--2e+0At4g271402S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1S.X.H.G.
0.5779.2TaAffx.37633.1.S1_atBJ270861--2e-2At2g39110protein kinase, putativeS.X.H.G.
0.5374.9TaAffx.17013.2.S1_x_atCA730181--1e+0At4g10250ATHSP22.0S.X.H.G.
0.4666.8TaAffx.43678.1.S1_x_atBF200239--9e+0At2g40100LHCB4.3 (light harvesting complex PSII)S.X.H.G.
0.3854.7Ta.13966.2.S1_s_atCK198271--2e-1At5g09750HEC3 (HECATE 3)S.X.H.G.
0.3549.8Ta.30507.1.S1_atCK214499--2e+0At5g35230unknown proteinS.X.H.G.
0.3346.9TaAffx.84007.1.S1_atCA646483--1e+1Atcg00560-S.X.H.G.
0.3244.4TaAffx.33753.2.S1_s_atBQ168712--2e+1At2g45630oxidoreductase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.999.9GSM138153genotype G32 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
13.199.4GSM138188genotype F38a developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
11.099.3GSM138169genotype B68 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.499.2GSM138154genotype H5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.299.2GSM138162genotype E5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.699.1GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat development
9.499.1GSM138184genotype C25 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.698.9GSM138195genotype J15 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.398.8GSM138149genotype F29 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.998.4GSM143518Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.273e-2099TaAffx.43678.1.S1_x_atBF200239--9e+0At2g40100LHCB4.3 (light harvesting complex PSII)C.G.S.X.
0.066e-342Ta.22743.1.S1_x_atCA652933--7e+0At4g12090cornichon family proteinC.G.S.X.
0.042e-240TaAffx.28701.1.S1_atCA657322--8e-1At3g12685-C.G.S.X.
0.034e-136TaAffx.71649.1.A1_atBG906531--7e+0At5g22608unknown proteinC.G.S.X.
0.044e-136TaAffx.54707.1.S1_atCA678023--4e+0At2g34340unknown proteinC.G.S.X.
0.034e-136Ta.3278.2.A1_atCA600447--1e-6At1g56340CRT1 (CALRETICULIN 1)C.G.S.X.
0.034e-136Ta.22111.2.S1_atCA696199--4e+0At5g36710unknown proteinC.G.S.X.
0.034e-136Ta.22111.2.S1_x_atCA696199--4e+0At5g36710unknown proteinC.G.S.X.
0.031e+034TaAffx.92864.1.S1_atBJ244455--4e+0At5g15670F-box family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.054e-446Arabidopsis thalianaAt2g45040819111matrix metalloproteinaseF:metallopeptidase activity, metalloendopeptidase activity;P:proteolysis, metabolic process;C:anchored to membrane;MOPBVFA---C.G.S.X.
0.163e-859Glycine maxGmaAffx.21553.1.S1_atBE023327--2e-9At2g45040matrix metalloproteinaseC.G.S.X.
0.357e-47186Hordeum vulgareContig19453_atContig19453--5e+0Atcg00140-C.G.S.X.
0.321e-94347Oryza sativaOs06g02391009634.m01307-Peptidase M10A and M12B, matrixin and adamalysinfamily protein2e-3At2g45040matrix metalloproteinaseC.G.S.X.
0.037e+032Populus trichocarpaPtpAffx.219645.1.S1_atpmrna35609hypothetical protein-5e+0At3g50550unknown proteinC.G.S.X.
0.032e+128Vitis vinifera1615960_atCF209193--3e+0At4g21740unknown proteinC.G.S.X.
0.042e+032Zea maysZm.4024.1.A1_atAY105692.1--1e-3At2g35170MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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