Gene omics information

Query gene ID	Ta.8457.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.8457.1.A1_at	BE430699	-	-	6e+0	At2g20619	-	S.X.	H.G.	Please select
0.80	92.2	Ta.27783.1.S1_at	BQ237765	-	-	2e-19	At4g15415	ATB' GAMMA	S.X.	H.G.	Please select
0.77	90.8	Ta.8457.2.A1_at	BQ161925	-	-	1e+1	At4g00220	JLO (JAGGED LATERAL ORGANS)	S.X.	H.G.	Please select
0.55	76.8	TaAffx.11930.1.S1_s_at	CA639901	-	-	3e-5	At2g30330	GCN5L1 family protein	S.X.	H.G.	Please select
0.53	74.9	Ta.3348.1.S1_a_at	BJ314622	-	-	3e-52	At1g14400	UBC1 (UBIQUITIN CARRIER PROTEIN 1)	S.X.	H.G.	Please select
0.40	58.4	Ta.9207.1.S1_at	CK212610	-	-	1e-8	At1g79590	SYP52 (SYNTAXIN OF PLANTS 52)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
25.9	99.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
15.2	99.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
10.3	99.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.2	98.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.6	98.7	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.4	97.7	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.9	97.3	GSM298065	Leaf tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.55	7e-126	450	Ta.8457.1.A1_a_at	BE430699	-	-	6e+0	At2g20619	-	C.G.	S.X.	Please select
0.55	7e-126	450	Ta.8457.1.A1_x_at	BE430699	-	-	6e+0	At2g20619	-	C.G.	S.X.	Please select
0.26	3e-51	202	Ta.8457.2.A1_at	BQ161925	-	-	1e+1	At4g00220	JLO (JAGGED LATERAL ORGANS)	C.G.	S.X.	Please select
0.11	8e-21	101	TaAffx.39302.1.A1_at	BG909701	-	-	1e+1	At5g53860	emb2737 (embryo defective 2737)	C.G.	S.X.	Please select
0.09	5e-16	85	TaAffx.15889.1.A1_at	BQ802523	-	-	4e-1	At5g11640	-	C.G.	S.X.	Please select
0.09	4e-13	75	TaAffx.31746.1.S1_at	CA608614	-	-	4e+0	At4g28290	unknown protein	C.G.	S.X.	Please select
0.08	7e-12	71	Ta.4697.1.S1_at	BJ270201	-	-	7e+0	At4g28730	glutaredoxin family protein	C.G.	S.X.	Please select
0.06	4e-10	65	Ta.11718.1.A1_at	BJ273296	-	-	8e+0	At3g43950	phosphotransferase, alcohol group as acceptor	C.G.	S.X.	Please select
0.08	2e-9	63	TaAffx.119802.1.S1_at	BJ213327	-	-	4e+0	At5g57785	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	6e+0	32	Arabidopsis thaliana	At2g20619	5007892	-	Encodes a Plant thionin family protein	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	5e-1	36	Glycine max	HgAffx.4083.1.A1_at	CK348607	-	-	9e+0	At5g38360	catalytic	C.G.	S.X.	Please select
0.14	5e-14	77	Hordeum vulgare	HB04L12r_at	HB04L12r	-	-	4e+0	At5g55360	long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein	C.G.	S.X.	Please select
0.05	3e-6	54	Oryza sativa	Os11g0127700	AK103742.1	-	Hypothetical protein	2e-1	At1g49480	RTV1 (related to vernalization1 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e-6	54	Populus trichocarpa	PtpAffx.2152.1.S1_s_at	CV254452	hypothetical protein	-	5e-5	At3g13410	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	7e-3	40	Vitis vinifera	1611513_s_at	CF414212	hypothetical protein LOC100262157	-	2e-1	At3g49950	scarecrow transcription factor family protein	C.G.	S.X.	Please select
0.04	2e-4	46	Zea mays	Zm.6514.1.A1_at	CF636002	hypothetical protein LOC100276806	-	7e-1	At5g38317	LCR58 (Low-molecular-weight cysteine-rich 58)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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