CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.8413.1.A1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 93.4 Ta.8413.1.A1_at CA703631 - - 1e+0 At4g03960 tyrosine specific protein phosphatase family protein S.X. H.G.
0.55 76.8 Ta.29432.1.S1_at BJ215997 - - 1e-2 At1g05530 UGT75B2 (UDP-GLUCOSYL TRANSFERASE 75B2) S.X. H.G.
0.50 72.4 Ta.1382.1.S1_x_at BQ237866 - - 8e-23 At1g64650 - S.X. H.G.
0.29 39.2 Ta.28368.1.S1_x_at CK206492 Type 1 non-specific lipid transfer protein precursor - 8e+0 At5g63087 - S.X. H.G.
0.27 35.6 Ta.1382.3.S1_a_at CA637786 - - 3e-10 At4g27720 - S.X. H.G.
0.19 22.4 Ta.1227.1.A1_at BQ160869 - - 2e+1 At1g47780 acyl-protein thioesterase-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.6 99.1 GSM111232 genotype H8 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
6.4 98.2 GSM111196 genotype J15 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
6.4 98.2 GSM111198 genotype A77 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
4.8 97.2 GSM111228 genotype B65 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
4.7 97.1 GSM111227 genotype F48 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
4.5 96.9 GSM138213 genotype C10 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.4 96.8 GSM111226 genotype F48 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
4.3 96.7 GSM314283 tissue type: 3-5 DAP caryopsis - rep3 GSE12508 Transcription patterns during wheat development
4.2 96.6 GSM111242 genotype C10 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
4.2 96.6 GSM111192 genotype F38a developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.64 4e-99 361 TaAffx.57132.1.S1_at CA635926 - - 4e+0 At5g51140 pseudouridine synthase family protein C.G. S.X.
0.05 7e-5 48 TaAffx.114447.1.S1_at CN011130 - - 5e+0 At1g37140 MCT1 (mei2 C-Terminal RRM only like 1) C.G. S.X.
0.02 3e-1 36 Ta.7947.1.S1_at CD938215 - - 2e+0 At4g03960 tyrosine specific protein phosphatase family protein C.G. S.X.
0.03 1e+0 34 TaAffx.5542.1.S1_at CA707528 - - 1e+0 At3g09230 AtMYB1 (myb domain protein 1) C.G. S.X.
0.03 1e+0 34 TaAffx.38453.2.S1_at BJ232174 - - 2e+1 At5g50540 unknown protein C.G. S.X.
0.03 1e+0 34 TaAffx.19531.1.A1_x_at CK208119 - - 1e+0 At2g42750 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.03 1e+0 34 TaAffx.19531.1.A1_s_at CK208119 - - 1e+0 At2g42750 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.04 4e+0 32 TaAffx.86959.1.S1_s_at CA598144 - - 4e+0 At5g65130 AP2 domain-containing transcription factor, putative C.G. S.X.
0.03 4e+0 32 TaAffx.84973.1.S1_at CA626716 - - 9e-1 At1g78470 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At4g03960 825706 tyrosine specific protein phosphatase family protein F:phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity;P:dephosphorylation;C:cellular_component unknown;FPOBM - - - C.G. S.X.
0.02 6e+0 32 Glycine max PsAffx.CL389Contig1_s_at PsAffx.CL389Contig1 - - 6e+0 At3g20980 unknown protein C.G. S.X.
0.64 2e-52 204 Hordeum vulgare Contig10304_at Contig10304 - - 3e+0 Atmg00750 - C.G. S.X.
0.05 2e-6 54 Oryza sativa Os01g0753800 AK121555.1 - Conserved hypothetical protein 3e+0 At5g47640 NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2) C.G. S.X.
0.03 2e+1 30 Populus trichocarpa PtpAffx.217007.1.S1_at pmrna32106 hypothetical protein - 2e+1 At4g19150 ankyrin repeat family protein C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1619139_at CB919812 hypothetical protein LOC100261695 - 5e-6 At1g04070 TOM22-I (TRANSLOCASE OF OUTER MEMBRANE 22-I) C.G. S.X.
0.04 1e-1 36 Zea mays Zm.10085.1.A1_at BM382598 - - 6e+0 At4g02270 pollen Ole e 1 allergen and extensin family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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