Gene omics information

Query gene ID	Ta.8291.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.8291.1.A1_at	BQ161700	-	-	1e+0	At4g08330	unknown protein	S.X.	H.G.	Please select
0.01	2.4	TaAffx.65793.1.A1_at	BJ221345	-	-	2e+0	At2g24625	-	S.X.	H.G.	Please select
0.01	2.4	Ta.11339.1.A1_at	BQ169879	-	-	2e+0	At5g45870	Bet v I allergen family protein	S.X.	H.G.	Please select
0.01	2.4	Ta.11230.1.A1_at	BQ169662	-	-	3e+0	At4g34330	unknown protein	S.X.	H.G.	Please select
0.00	0.7	Ta.6537.2.A1_a_at	CD373701	-	-	9e-2	At1g33140	PGY2 (PIGGYBACK2)	S.X.	H.G.	Please select
0.00	0.7	TaAffx.64240.1.A1_at	BJ308543	-	-	4e+0	At2g18400	ribosomal protein L6 family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
28.0	99.8	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
18.3	99.7	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
14.5	99.5	GSM111197	genotype J15 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
14.1	99.5	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
13.4	99.5	GSM111175	genotype G30 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
12.2	99.4	GSM138194	genotype J15 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.9	99.1	GSM111214	genotype C58 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
9.4	99.1	GSM138155	genotype H5 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.5	98.9	GSM111242	genotype C10 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
7.8	98.7	GSM138183	genotype A10 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.15	2e-39	163	TaAffx.62875.1.S1_at	BJ274261	-	-	3e+0	At4g32610	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.22317.1.S1_at	CD892646	-	-	2e-85	At1g56340	CRT1 (CALRETICULIN 1)	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.22317.1.S1_s_at	CD892646	calreticulin-like protein	-	2e-85	At1g56340	CRT1 (CALRETICULIN 1)	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.108957.1.S1_at	CA681887	-	-	4e+0	At1g60870	MEE9 (maternal effect embryo arrest 9)	C.G.	S.X.	Please select
0.01	4e+0	32	Ta.21335.1.S1_a_at	BJ321089	-	-	0	At5g42020	BIP2	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.21335.2.A1_x_at	BJ250236	-	-	2e-93	At5g42020	BIP2	C.G.	S.X.	Please select
0.01	4e+0	32	Ta.21335.1.S1_at	BJ321089	-	-	0	At5g42020	BIP2	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.12287.2.S1_a_at	CA639227	-	-	7e-42	At4g21710	NRPB2	C.G.	S.X.	Please select
0.02	2e+1	30	TaAffx.93179.1.S1_at	BJ230804	-	-	1e-4	At1g01940	peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	At4g08330	826387	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	34	Glycine max	GmaAffx.52051.1.S1_at	CA802879	-	-	1e-2	At1g43020	unknown protein	C.G.	S.X.	Please select
0.03	5e-1	34	Hordeum vulgare	EBan01_SQ004_H17_at	EBan01_SQ004_H17	-	-	6e-2	At3g51040	RTH (RTE1-HOMOLOG)	C.G.	S.X.	Please select
0.04	5e-1	36	Oryza sativa	OsAffx.9388.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	4e-1	36	Populus trichocarpa	PtpAffx.67578.1.A1_at	DN493351	-	-	5e+0	At5g26990	drought-responsive family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	30	Vitis vinifera	1620010_at	CA813625	-	-	3e+0	At5g40700	unknown protein	C.G.	S.X.	Please select
0.03	7e+0	30	Zea mays	Zm.15000.1.A1_at	BG840495	hypothetical protein LOC100217162	-	1e+0	At2g34100	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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