CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.8258.3.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.8258.3.S1_at CN012816 - - 1e+0 At3g63095 - S.X. H.G.
0.91 98.2 Ta.10068.1.S1_at AL830062 - - 8e-2 At3g07510 unknown protein S.X. H.G.
0.91 98.2 Ta.10042.1.S1_at CK205237 - - 2e-4 At4g28780 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.91 98.2 Ta.8258.2.S1_at BJ233335 - - 1e+0 At3g63095 - S.X. H.G.
0.80 92.2 Ta.22816.1.S1_x_at CD885331 type 2 non-specific lipid transfer protein precursor - 4e+0 At1g24510 T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative S.X. H.G.
0.77 90.8 Ta.11619.1.A1_at CN011986 - - 2e+1 At3g28958 plastocyanin-like domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.0 96.3 GSM111219 genotype F29 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
4.0 96.3 GSM111184 genotype C22 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.9 96.1 GSM111189 genotype H9 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.8 96.0 GSM111224 genotype A81 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.8 96.0 GSM111178 genotype DH95 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.7 95.8 GSM111174 genotype G30 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.7 95.8 GSM111176 genotype E5 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.6 95.6 GSM111214 genotype C58 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4 95.2 GSM111204 genotype B10 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4 95.2 GSM111175 genotype G30 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.53 3e-137 488 Ta.8258.2.S1_at BJ233335 - - 1e+0 At3g63095 - C.G. S.X.
0.51 1e-123 442 Ta.8258.1.S1_x_at CN011845 - - 1e+0 At3g63095 - C.G. S.X.
0.44 4e-102 371 Ta.22816.1.S1_x_at CD885331 type 2 non-specific lipid transfer protein precursor - 4e+0 At1g24510 T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative C.G. S.X.
0.26 3e-41 169 Ta.30755.1.S1_at CN007962 - - 1e+0 At3g09750 unknown protein C.G. S.X.
0.28 8e-39 161 TaAffx.70216.1.S1_s_at AJ297768.1 - - 5e-13 At5g19990 RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A) C.G. S.X.
0.25 3e-38 159 Ta.30755.2.S1_x_at CA702464 - - 1e+0 At5g39170 unknown protein C.G. S.X.
0.25 1e-37 157 Ta.28327.1.S1_x_at CD916923 - - 2e+0 At3g57510 ADPG1 C.G. S.X.
0.12 4e-19 95 Ta.30757.2.A1_at CA717906 - - 1e+0 At5g22000 RHF2A (RING-H2 GROUP F2A) C.G. S.X.
0.20 2e-17 89 Ta.13690.1.S1_at CA706938 - - 2e+0 At3g08610 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At3g63095 5008106 - Encodes a Protease inhibitor/seed storage/LTP family protein - - - C.G. S.X.
0.02 4e-1 36 Glycine max GmaAffx.9588.2.S1_at CA935619 - - 2e+0 At3g02860 zinc ion binding C.G. S.X.
0.43 8e-65 246 Hordeum vulgare Contig150_at Contig150 - - 1e+0 At3g63095 - C.G. S.X.
0.11 1e-11 71 Oryza sativa Os03g0111300 AK062506.1 - Nonspecific lipid-transfer protein 2 (nsLTP2) (7kDa lipid transfer protein) 3e-1 At3g22275 unknown protein C.G. S.X.
0.04 7e+0 32 Populus trichocarpa PtpAffx.221693.1.S1_x_at pmrna38709 hypothetical protein - 1e-1 At5g52440 HCF106 C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1617043_at CF514790 hypothetical protein LOC100255806 - 4e+0 At5g65120 unknown protein C.G. S.X.
0.12 4e-11 67 Zea mays Zm.17087.1.S1_at BM267086 nonspecific lipid-transfer protein - 1e+1 At3g10915 reticulon family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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