Gene omics information

Query gene ID Ta.8245.2.S1_x_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9599.1Ta.8245.2.S1_x_atCA680416--4e+0At5g13570DCP2 (DECAPPING 2)S.X.H.G.
0.7087.2TaAffx.29314.1.S1_atCA645755--1e+0At5g10880tRNA synthetase-related / tRNA ligase-relatedS.X.H.G.
0.7087.2Ta.815.3.S1_s_atCA677640--1e+0At1g17400unknown proteinS.X.H.G.
0.7087.2Ta.8245.2.S1_atCA680416--4e+0At5g13570DCP2 (DECAPPING 2)S.X.H.G.
0.6583.9TaAffx.53813.1.S1_atCA688853--5e+0At4g23432unknown proteinS.X.H.G.
0.6383.1Ta.6467.3.A1_atCA630700--4e+0At5g67640unknown proteinS.X.H.G.
0.6383.1Ta.22346.2.A1_atCA741140--8e-1At2g21560unknown proteinS.X.H.G.
0.5979.8TaAffx.28148.1.S1_s_atCA664492--4e+0At4g03950glucose-6-phosphate/phosphate translocator, putativeS.X.H.G.
0.5979.8TaAffx.51204.1.S1_atCA729440--3e+0At1g15850transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.5879.2TaAffx.113667.1.S1_atCA607183--1e+0At1g19130-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.199.4GSM298060Crown tissue of Harnesk at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
10.799.2GSM298061Crown tissue of Harnesk at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
9.499.1GSM298062Crown tissue of Harnesk at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
9.299.0GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
9.299.0GSM111175genotype G30 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
8.898.9GSM298085Crown tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
8.398.8GSM298088Crown tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
8.098.8GSM138193genotype B33 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.498.6GSM298059Crown tissue of Harnesk at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
7.498.6GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.900775Ta.8245.2.S1_atCA680416--4e+0At5g13570DCP2 (DECAPPING 2)C.G.S.X.
0.330674Ta.8245.1.S1_atCD922906--2e-35At1g0481026S proteasome regulatory subunit, putativeC.G.S.X.
0.126e-21101Ta.8245.3.S1_atCA661439--1e+0At2g32360ubiquitin family proteinC.G.S.X.
0.126e-21101Ta.8245.3.S1_a_atCA661439--1e+0At2g32360ubiquitin family proteinC.G.S.X.
0.126e-21101Ta.8245.3.S1_x_atCA661439--1e+0At2g32360ubiquitin family proteinC.G.S.X.
0.021e+034Ta.1595.1.S1_atBQ801056--6e-1At3g47440TIP5C.G.S.X.
0.035e+032TaAffx.78655.1.S1_atCA729583--2e+1Atcg00160-C.G.S.X.
0.035e+032TaAffx.78655.1.S1_x_atCA729583--2e+1Atcg00160-C.G.S.X.
0.035e+032TaAffx.29561.1.S1_atCA639993--9e-1At4g32105galactosyltransferaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e+032Arabidopsis thalianaAt5g13570831201DCP2 (DECAPPING 2)Encodes DCP2 with mRNA decapping activity. DCP2 forms a mRNA decapping complex with DCP1 (At1g08370) and VCS (VARICOSE) (At3g13300). Recombinant DCP2 is enzymatically active in vitro, generating from capped mRNAs m7GDP, and 5-phosphorylated mRNAs. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP1.---C.G.S.X.
0.032e+034Glycine maxPsAffx.psMY009iF05r_s_atPsAffx.psMY009iF05r--4e+0At5g28615-C.G.S.X.
0.353e-141500Hordeum vulgareContig9627_atContig9627--3e-31At2g3273026S proteasome regulatory subunit, putativeC.G.S.X.
0.046e-136Oryza sativaOsAffx.15291.1.S1_at---0C.G.S.X.
0.036e+032Populus trichocarpaPtpAffx.71160.1.S1_atCK107602hypothetical protein-1e+0Atcg00330-C.G.S.X.
0.038e-236Vitis vinifera1612089_atCF212718--2e+0At5g12235CLE22 (CLAVATA3/ESR-RELATED 22)C.G.S.X.
0.048e-650Zea maysZm.2706.1.A1_atBM335618--3e-43At2g3273026S proteasome regulatory subunit, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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