Gene omics information

Query gene ID	Ta.822.2.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.822.2.S1_x_at	CD901100	-	-	1e-90	At4g40040	histone H3.2	S.X.	H.G.	Please select
0.61	82.0	Ta.4980.1.S1_at	CK213203	-	-	9e+0	At5g51990	CBF4 (C- REPEAT-BINDING FACTOR 4)	S.X.	H.G.	Please select
0.46	66.8	Ta.28553.8.S1_x_at	BJ217307	ubiquitin	-	6e-106	At4g05050	UBQ11 (UBIQUITIN 11)	S.X.	H.G.	Please select
0.46	66.8	Ta.21374.2.S1_at	CK208435	-	-	8e-66	At5g58290	RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)	S.X.	H.G.	Please select
0.31	42.7	Ta.1797.1.S1_x_at	CK208870	-	-	6e-32	At5g51940	NRPB6A	S.X.	H.G.	Please select
0.29	39.2	Ta.22845.1.S1_at	BJ215922	tat binding protein	-	7e-54	At1g09100	RPT5B (26S proteasome AAA-ATPase subunit RPT5B)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.0	94.3	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.8	93.6	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6	92.9	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.5	92.5	GSM139919	Anther diplotene-anaphaseI rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.3	91.5	GSM139915	Anther pre-meiosis rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.3	91.5	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.3	91.5	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.64	0	767	Ta.822.1.S1_x_at	BJ309480	-	-	3e-95	At4g40040	histone H3.2	C.G.	S.X.	Please select
0.48	2e-95	349	TaAffx.8864.1.S1_at	CA619007	-	-	6e-67	At4g40040	histone H3.2	C.G.	S.X.	Please select
0.44	6e-65	248	TaAffx.518.1.S1_x_at	BQ802465	-	-	3e-15	At4g40040	histone H3.2	C.G.	S.X.	Please select
0.44	6e-65	248	TaAffx.518.1.S1_at	BQ802465	-	-	3e-15	At4g40040	histone H3.2	C.G.	S.X.	Please select
0.37	6e-56	218	Ta.27101.11.S1_at	BJ262694	-	-	1e-25	At5g10980	histone H3	C.G.	S.X.	Please select
0.43	6e-53	208	TaAffx.113263.6.S1_at	BE213282	-	-	3e-26	At1g09200	histone H3	C.G.	S.X.	Please select
0.39	1e-50	200	Ta.27101.5.S1_x_at	BJ309242	-	-	3e-45	At1g09200	histone H3	C.G.	S.X.	Please select
0.37	8e-49	194	Ta.27101.10.S1_x_at	AJ613323	-	-	1e-26	At5g10980	histone H3	C.G.	S.X.	Please select
0.36	2e-46	186	Ta.27101.3.S1_x_at	CK209895	-	-	4e-38	At1g09200	histone H3	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.52	1e-90	333	Arabidopsis thaliana	At4g40040	830165	histone H3.2	F:DNA binding;P:nucleosome assembly;C:nucleus, nucleosome;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.42	1e-36	155	Glycine max	Gma.6283.1.A1_at	CD397881	-	-	1e-34	At5g65360	histone H3	C.G.	S.X.	Please select
0.71	0	753	Hordeum vulgare	Contig136_s_at	Contig136	-	-	2e-98	At4g40040	histone H3.2	C.G.	S.X.	Please select
0.46	2e-165	583	Oryza sativa	Os04g0450800	AY525328.1	-	Histone H3 family protein	2e-105	At4g40040	histone H3.2	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.44	1e-48	194	Populus trichocarpa	PtpAffx.18340.1.S1_at	CV263209	histone H3	-	8e-39	At5g10400	histone H3	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.44	2e-43	174	Vitis vinifera	1620332_at	CF415733	similar to predicted protein	-	1e-71	At5g10390	histone H3	C.G.	S.X.	Please select
0.41	2e-121	434	Zea mays	Zm.14352.2.S1_at	AY104356.1	hypothetical protein LOC100192746	-	5e-93	At4g40040	histone H3.2	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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