Gene omics information

Query gene ID	Ta.8149.1.A1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	90.8	Ta.8149.1.A1_x_at	CK205375	-	-	7e-35	At4g14240	-	S.X.	H.G.	Please select
0.55	76.8	Ta.7856.1.S1_at	CD873175	-	-	5e-1	At1g54820	protein kinase family protein	S.X.	H.G.	Please select
0.53	74.9	TaAffx.71229.1.A1_at	BE492094	-	-	7e+0	At4g10595	LCR2 (Low-molecular-weight cysteine-rich 2)	S.X.	H.G.	Please select
0.52	73.7	Ta.12106.1.S1_at	BT009522.1	-	-	6e-23	At2g01350	QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE)	S.X.	H.G.	Please select
0.49	69.7	Ta.3001.1.S1_at	CK211723	-	-	4e-21	At5g56140	KH domain-containing protein	S.X.	H.G.	Please select
0.48	69.0	Ta.8034.1.A1_at	BQ161157	-	-	2e-3	At3g56480	myosin heavy chain-related	S.X.	H.G.	Please select
0.45	65.2	Ta.12707.1.A1_a_at	CD491136	-	-	5e+0	At4g20870	FAH2 (FATTY ACID HYDROXYLASE 2)	S.X.	H.G.	Please select
0.44	64.5	Ta.11816.1.A1_at	BQ170854	-	-	2e+0	At4g08590	ORTHL (ORTHRUS-LIKE)	S.X.	H.G.	Please select
0.44	64.5	Ta.22932.1.S1_x_at	CA685443	-	-	1e+0	At4g15710	unknown protein	S.X.	H.G.	Please select
0.42	60.9	Ta.5420.1.S1_at	CD452372	-	-	1e+0	At3g01660	methyltransferase	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.0	99.3	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
10.4	99.2	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.0	98.0	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.4	97.7	GSM298080	Leaf tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.5	96.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM298056	Leaf tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.31	5e-153	541	Ta.28933.1.S1_at	BJ311795	-	-	5e-46	At4g14240	-	C.G.	S.X.	Please select
0.23	3e-83	309	Ta.28933.2.S1_at	CA726102	-	-	9e-26	At4g14240	-	C.G.	S.X.	Please select
0.02	5e-5	50	Ta.10675.1.A1_at	CK153822	-	-	1e+0	At5g07000	ST2B (SULFOTRANSFERASE 2B)	C.G.	S.X.	Please select
0.03	2e-4	48	Ta.7652.1.S1_at	CK207308	-	-	4e-15	At4g22330	ATCES1	C.G.	S.X.	Please select
0.02	2e-4	48	Ta.28686.1.S1_at	BJ307988	-	-	2e-16	At5g66280	GMD1 (GDP-D-MANNOSE 4,6-DEHYDRATASE 1)	C.G.	S.X.	Please select
0.03	2e-4	48	Ta.13761.1.S1_s_at	AL820456	-	-	2e+0	At2g25052	unknown protein	C.G.	S.X.	Please select
0.02	8e-4	46	Ta.2018.1.S1_at	CK159755	-	-	6e-2	At2g35880	-	C.G.	S.X.	Please select
0.02	3e-3	44	Ta.7672.1.S1_at	CK160624	-	-	3e+0	At4g39820	binding	C.G.	S.X.	Please select
0.04	3e-3	44	Ta.6953.1.A1_at	BJ318751	-	-	2e+0	At2g06200	AtGRF6 (GROWTH-REGULATING FACTOR 6)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	7e-35	149	Arabidopsis thaliana	At4g14240	827065	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.22	2e-23	111	Glycine max	GmaAffx.84688.1.S1_at	AI460889	-	-	5e-24	At4g14240	-	C.G.	S.X.	Please select
0.67	0	1881	Hordeum vulgare	Contig11796_at	Contig11796	-	-	9e-35	At4g14240	-	C.G.	S.X.	Please select
0.43	3e-174	613	Oryza sativa	Os05g0395300	AK066212.1	-	-	3e-47	At4g14240	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	1e-12	75	Populus trichocarpa	PtpAffx.12275.1.A1_at	CV251154	hypothetical protein	-	1e-31	At4g14240	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	8e-1	34	Vitis vinifera	1615572_at	CD714739	-	-	1e+0	At1g64040	TOPP3	C.G.	S.X.	Please select
0.31	3e-66	252	Zea mays	Zm.6954.1.S1_at	CF006215	-	-	2e-19	At4g14240	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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