CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.8128.1.S1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 90.8 Ta.8128.1.S1_x_at BQ161382 - - 4e-12 At3g62600 ATERDJ3B S.X. H.G.
0.67 86.3 Ta.8128.2.S1_x_at CA667693 - - 8e-2 At3g62600 ATERDJ3B S.X. H.G.
0.67 86.3 Ta.28735.1.S1_a_at BJ250459 - - 5e-50 At4g24190 SHD (SHEPHERD) S.X. H.G.
0.67 86.3 Ta.8128.2.S1_a_at CA667693 - - 8e-2 At3g62600 ATERDJ3B S.X. H.G.
0.27 35.6 TaAffx.49805.1.S1_at BQ802274 - - 5e+0 At4g00070 - S.X. H.G.
0.20 24.0 Ta.3942.1.S1_a_at BJ255487 - - 3e-9 At4g23650 CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.5 99.2 GSM143502 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.3 98.6 GSM143509 Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.8 98.4 GSM143517 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.8 97.9 GSM143519 Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.2 97.5 GSM143518 Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.0 97.4 GSM143520 Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.9 97.3 GSM143504 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.8 97.2 GSM143510 Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.7 97.1 GSM143515 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.6 97.0 GSM138184 genotype C25 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.41 3e-142 506 Ta.8128.2.S1_a_at CA667693 - - 8e-2 At3g62600 ATERDJ3B C.G. S.X.
0.41 3e-142 506 Ta.8128.2.S1_x_at CA667693 - - 8e-2 At3g62600 ATERDJ3B C.G. S.X.
0.08 3e-22 107 Ta.8128.3.A1_at BJ299348 - - 1e+1 At2g14935 LCR40 (Low-molecular-weight cysteine-rich 40) C.G. S.X.
0.03 4e-6 54 Ta.5366.2.S1_at CA615327 - - 4e+0 At2g13125 unknown protein C.G. S.X.
0.02 4e-6 54 Ta.5366.1.S1_at BJ217165 - - 8e-38 At1g68370 ARG1 (ALTERED RESPONSE TO GRAVITY 1) C.G. S.X.
0.03 6e-5 50 Ta.9949.1.S1_at CD895196 - - 5e+0 At4g39990 RABA4B (RAB GTPASE HOMOLOG A4B) C.G. S.X.
0.06 3e-3 44 TaAffx.31472.1.S1_at CA615400 - - 4e+0 At5g19315 - C.G. S.X.
0.02 3e-3 44 TaAffx.31173.1.S1_at CA618821 - - 3e-1 At5g39470 F-box family protein C.G. S.X.
0.02 3e-3 44 Ta.9254.1.S1_at CD932508 - - 9e-10 At3g08910 DNAJ heat shock protein, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 4e-12 73 Arabidopsis thaliana At3g62600 825434 ATERDJ3B J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. - - - C.G. S.X.
0.13 5e-9 63 Glycine max Gma.2546.1.S1_at CA783454 - - 6e-35 At3g62600 ATERDJ3B C.G. S.X.
0.89 0 2091 Hordeum vulgare Contig7280_at Contig7280 - - 3e-12 At3g62600 ATERDJ3B C.G. S.X.
0.50 3e-162 573 Oryza sativa Os05g0156500 AK062718.1 - Apobec-1 binding protein 2 2e-10 At3g62600 ATERDJ3B C.G. S.X.
0.19 2e-24 115 Populus trichocarpa PtpAffx.80014.1.S1_at CV264509 hypothetical protein - 1e-24 At3g62600 ATERDJ3B C.G. S.X.
0.24 7e-14 77 Vitis vinifera 1620520_s_at BQ797142 hypothetical protein LOC100252105 - 2e-23 At3g62600 ATERDJ3B C.G. S.X.
0.56 4e-161 567 Zea mays Zm.5074.1.A1_at AI600716 - - 5e-14 At3g62600 ATERDJ3B C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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