Gene omics information

Query gene ID	Ta.8093.2.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.93	98.7	Ta.8093.2.S1_a_at	CA615237	-	-	1e-12	At5g65760	serine carboxypeptidase S28 family protein	S.X.	H.G.	Please select
0.54	75.5	Ta.4063.3.S1_at	CA732547	-	-	8e-1	At5g66570	PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1)	S.X.	H.G.	Please select
0.54	75.5	TaAffx.85941.1.S1_at	CA618291	-	-	2e+1	At5g23760	heavy-metal-associated domain-containing protein	S.X.	H.G.	Please select
0.53	74.9	TaAffx.39326.1.S1_at	BG909116	-	-	5e+0	At5g44170	-	S.X.	H.G.	Please select
0.49	69.7	TaAffx.39451.1.S1_at	BG905127	-	-	3e+0	At2g18920	unknown protein	S.X.	H.G.	Please select
0.48	69.0	TaAffx.79532.1.S1_at	CA713411	-	-	3e+1	At4g02360	unknown protein	S.X.	H.G.	Please select
0.48	69.0	Ta.26301.1.A1_at	CD490595	-	-	2e+0	At1g75460	ATP-dependent protease La (LON) domain-containing protein	S.X.	H.G.	Please select
0.46	66.8	Ta.7193.3.S1_at	CA718160	-	-	1e+1	At5g08400	unknown protein	S.X.	H.G.	Please select
0.46	66.8	TaAffx.6157.1.S1_at	CA690748	-	-	4e+0	At2g42930	glycosyl hydrolase family protein 17	S.X.	H.G.	Please select
0.44	64.5	Ta.6762.3.S1_at	BJ246546	-	-	1e+0	At5g61490	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.7	97.1	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
4.3	96.7	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM111237	genotype F38b developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4	95.2	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
3.3	95.0	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1025	Ta.8093.2.S1_at	CA615237	-	-	1e-12	At5g65760	serine carboxypeptidase S28 family protein	C.G.	S.X.	Please select
0.33	2e-135	482	Ta.8093.1.S1_at	BQ161264	-	-	2e-10	At5g65760	serine carboxypeptidase S28 family protein	C.G.	S.X.	Please select
0.04	1e+0	34	TaAffx.97336.1.S1_at	BJ232255	-	-	1e+0	At1g29010	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.97455.1.A1_at	BQ169184	-	-	9e-1	At1g07476	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.91911.1.S1_at	BJ293167	-	-	6e-2	At4g13680	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.4882.1.S1_at	CA729612	-	-	4e+0	At5g47630	mtACP3 (mitochondrial acyl carrier protein 3)	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.4882.1.S1_x_at	CA729612	-	-	4e+0	At5g47630	mtACP3 (mitochondrial acyl carrier protein 3)	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.7433.1.S1_at	CD915272	-	-	3e-2	At4g31351	unknown protein	C.G.	S.X.	Please select
0.01	4e+0	32	Ta.2381.1.S1_at	CD373844	-	-	1e-2	At4g36780	transcription regulator	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	1e-12	73	Arabidopsis thaliana	At5g65760	836705	serine carboxypeptidase S28 family protein	F:serine-type peptidase activity;P:proteolysis;C:chloroplast, vacuole;MOFPB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.10	4e-10	65	Glycine max	GmaAffx.90992.1.S1_s_at	CF806717	-	-	2e-12	At5g65760	serine carboxypeptidase S28 family protein	C.G.	S.X.	Please select
0.03	8e+0	30	Hordeum vulgare	HVSMEn0005G03f_s_at	HVSMEn0005G03f	-	-	8e-1	At1g78080	RAP2.4 (related to AP2 4)	C.G.	S.X.	Please select
0.18	1e-26	121	Oryza sativa	Os01g0767100	AK109493.1	-	Lysosomal Pro-X carboxypeptidase	7e-11	At5g65760	serine carboxypeptidase S28 family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	1e-7	57	Populus trichocarpa	PtpAffx.50799.1.A1_at	CK091669	hypothetical protein	-	2e-18	At5g65760	serine carboxypeptidase S28 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.08	1e-6	52	Vitis vinifera	1614626_at	CF208834	-	-	1e-22	At5g65760	serine carboxypeptidase S28 family protein	C.G.	S.X.	Please select
0.07	9e-21	99	Zea mays	Zm.2636.1.A1_at	BQ538162	hypothetical protein LOC100217003	-	2e-7	At5g65760	serine carboxypeptidase S28 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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