Gene omics information

Query gene ID	Ta.7894.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.7894.1.S1_at	CA678008	-	-	1e-27	At2g45240	MAP1A (METHIONINE AMINOPEPTIDASE 1A)	S.X.	H.G.	Please select
0.67	86.3	Ta.20463.1.S1_at	BT009342.1	-	-	2e-5	At5g27470	seryl-tRNA synthetase / serine--tRNA ligase	S.X.	H.G.	Please select
0.60	81.0	Ta.1529.1.S1_at	CK153906	-	-	5e-21	At4g39280	phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative	S.X.	H.G.	Please select
0.44	64.5	Ta.2490.1.S1_at	BJ250631	-	-	4e-46	At3g59990	MAP2B (METHIONINE AMINOPEPTIDASE 2B)	S.X.	H.G.	Please select
0.40	58.4	Ta.8547.1.S1_at	M95747.1	initiation factor (iso)4f p82 subunit	-	8e-15	At5g57870	eukaryotic translation initiation factor 4F, putative / eIF-4F, putative	S.X.	H.G.	Please select
0.23	29.0	Ta.14560.1.S1_at	BJ274621	-	-	2e-40	At5g63400	ADK1 (ADENYLATE KINASE 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.1	98.1	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.6	97.8	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.9	97.3	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.7	97.1	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.9	96.1	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM139919	Anther diplotene-anaphaseI rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4	95.2	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.3	95.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.45	1e-178	626	TaAffx.81113.1.S1_s_at	CA689395	-	-	4e+0	At5g54190	PORA	C.G.	S.X.	Please select
0.31	1e-141	504	Ta.7894.3.A1_at	CA680072	-	-	4e+0	At3g51300	ROP1 (RHO-RELATED PROTEIN FROM PLANTS 1)	C.G.	S.X.	Please select
0.27	3e-53	210	Ta.7894.2.A1_at	BG904646	-	-	7e-1	At5g26320	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	C.G.	S.X.	Please select
0.27	3e-53	210	Ta.7894.2.A1_x_at	BG904646	-	-	7e-1	At5g26320	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	C.G.	S.X.	Please select
0.02	8e-1	36	TaAffx.30593.1.S1_at	CA623767	-	-	7e-1	At5g67640	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.84789.1.S1_at	BQ245854	-	-	6e+0	At4g25830	integral membrane family protein	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.104785.1.S1_at	CA744839	-	-	1e+1	At4g30280	XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18)	C.G.	S.X.	Please select
0.01	3e+0	34	Ta.13687.1.S1_at	CD454805	-	-	9e-3	At5g26110	ATP binding / catalytic/ protein kinase	C.G.	S.X.	Please select
0.02	3e+0	34	Ta.13687.2.S1_a_at	BJ211145	-	-	7e-5	At5g26110	ATP binding / catalytic/ protein kinase	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.32	1e-27	125	Arabidopsis thaliana	At2g45240	819132	MAP1A (METHIONINE AMINOPEPTIDASE 1A)	Encodes a cytoplasmic MAP1 like methionine aminopeptidase which is involved in removing the N-terminal methionine from proteins. Induced mutants using RNAi technology which knocks out both MAP1 and MAP2 like genes show abnormal development.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.19	6e-27	123	Glycine max	Gma.10853.1.A1_at	BI969928	-	-	7e-64	At2g45240	MAP1A (METHIONINE AMINOPEPTIDASE 1A)	C.G.	S.X.	Please select
0.55	0	827	Hordeum vulgare	Contig14374_at	Contig14374	-	-	2e-42	At2g45240	MAP1A (METHIONINE AMINOPEPTIDASE 1A)	C.G.	S.X.	Please select
0.65	0	963	Oryza sativa	Os10g0508400	AK066207.1	-	-	1e-8	At2g45240	MAP1A (METHIONINE AMINOPEPTIDASE 1A)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.29	2e-20	101	Populus trichocarpa	Ptp.6335.2.A1_a_at	CV239962	hypothetical protein	-	5e-65	At2g45240	MAP1A (METHIONINE AMINOPEPTIDASE 1A)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e-4	46	Vitis vinifera	1620475_at	CF205959.1	similar to MAP1D (METHIONINE AMINOPEPTIDASE 1D); metalloexopeptidase	-	7e-74	At4g37040	MAP1D (METHIONINE AMINOPEPTIDASE 1D)	C.G.	S.X.	Please select
0.61	0	985	Zea mays	Zm.16004.1.A1_a_at	CO533006	hypothetical protein LOC100274208 /// methionine aminopeptidase 1A	-	4e-21	At2g45240	MAP1A (METHIONINE AMINOPEPTIDASE 1A)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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