Gene omics information

Query gene ID	Ta.7892.1.A1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.2	Ta.7892.1.A1_a_at	BJ312151	-	-	4e+0	At3g01331	-	S.X.	H.G.	Please select
0.73	89.1	Ta.853.1.S1_at	AJ601815	-	-	7e-10	At5g20470	myosin, putative	S.X.	H.G.	Please select
0.40	58.4	TaAffx.9043.1.S1_at	CA615126	-	-	4e+0	At4g00530	unknown protein	S.X.	H.G.	Please select
0.38	54.7	Ta.22868.1.S1_at	CA710089	-	-	3e-53	At5g59160	TOPP2	S.X.	H.G.	Please select
0.29	39.2	Ta.7065.1.S1_at	BJ254686	-	-	4e-43	At3g03940	protein kinase family protein	S.X.	H.G.	Please select
0.12	13.3	Ta.21919.1.A1_at	CA708737	-	-	4e-4	At3g26850	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.0	98.5	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.3	96.7	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.7	95.8	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4	95.2	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	TaAffx.59813.1.S1_at	CA594925	-	-	3e-1	At2g13570	NF-YB7 (NUCLEAR FACTOR Y, SUBUNIT B7)	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.5967.1.S1_at	CA694279	-	-	4e+0	At3g22345	-	C.G.	S.X.	Please select
0.04	4e+0	32	TaAffx.38266.2.S1_at	BJ236870	-	-	1e+1	At5g60850	OBP4	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.9480.1.A1_a_at	CD905606	-	-	9e-9	At5g52410	unknown protein	C.G.	S.X.	Please select
0.04	4e+0	32	Ta.8168.1.A1_at	BQ161520	-	-	7e+0	At4g39955	hydrolase, alpha/beta fold family protein	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.6175.1.S1_at	CD906599	-	-	6e+0	At5g66300	NAC105 (NAC DOMAIN CONTAINING PROTEIN 105)	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.6175.1.S1_x_at	CD906599	-	-	6e+0	At5g66300	NAC105 (NAC DOMAIN CONTAINING PROTEIN 105)	C.G.	S.X.	Please select
0.04	4e+0	32	Ta.19622.1.S1_at	CA654295	-	-	1e-5	At1g66470	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please select
0.03	2e+1	30	TaAffx.85945.1.S1_at	CA618215	-	-	4e+0	At1g28310	Dof-type zinc finger domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e+0	32	Arabidopsis thaliana	At3g01331	5007976	-	Encodes a ECA1 gametogenesis related family protein	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e-1	36	Glycine max	Gma.13791.1.A1_at	CD405454	-	-	6e-1	At1g64405	unknown protein	C.G.	S.X.	Please select
0.04	7e+0	30	Hordeum vulgare	EBed07_SQ003_I06_at	EBed07_SQ003_I06	-	-	8e+0	At5g35870	unknown protein	C.G.	S.X.	Please select
0.03	7e+0	32	Oryza sativa	Os05g0531400	9633.m04262	-	Pollen Ole e 1 allergen and extensin domaincontaining protein	2e+0	At2g20890	PSB29	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+0	34	Populus trichocarpa	PtpAffx.86410.1.S1_s_at	CV283900	hypothetical protein	-	2e+1	At5g11425	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	32	Vitis vinifera	1622702_x_at	CF204380.1	-	-	7e+0	At5g48580	FKBP15-2	C.G.	S.X.	Please select
0.04	2e+0	32	Zea mays	ZmAffx.134.1.A1_at	AI667702	-	-	3e+0	At1g09220	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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