Gene omics information

Query gene ID	Ta.7882.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.7882.1.S1_x_at	BQ160849	-	-	2e+0	At4g16750	DRE-binding transcription factor, putative	S.X.	H.G.	Please select
0.80	92.2	Ta.9484.1.S1_at	AY462115.1	annexin	-	9e+0	At3g14600	60S ribosomal protein L18A (RPL18aC)	S.X.	H.G.	Please select
0.80	92.2	Ta.27036.1.S1_at	CA642314	-	-	3e-1	At5g54855	pollen Ole e 1 allergen and extensin family protein	S.X.	H.G.	Please select
0.71	88.0	Ta.7882.1.S1_at	BQ160849	-	-	2e+0	At4g16750	DRE-binding transcription factor, putative	S.X.	H.G.	Please select
0.50	72.4	Ta.25384.1.S1_at	CD879872	-	-	6e+0	At2g40830	RHC1A	S.X.	H.G.	Please select
0.42	60.9	Ta.7882.2.S1_at	CA645408	-	-	1e+0	At2g04790	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
68.2	100.0	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
65.8	99.9	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
47.6	99.9	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
23.3	99.8	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
16.8	99.6	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
13.6	99.5	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development
9.3	99.0	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
8.0	98.8	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.6	98.7	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.4	98.6	GSM314263	tissue type: seedling, crown - rep1	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.82	0	1255	Ta.7882.1.S1_at	BQ160849	-	-	2e+0	At4g16750	DRE-binding transcription factor, putative	C.G.	S.X.	Please select
0.39	5e-137	488	TaAffx.5194.1.S1_x_at	CA719397	-	-	2e+1	At1g10155	ATPP2-A10 (PHLOEM PROTEIN 2-A10)	C.G.	S.X.	Please select
0.43	3e-117	422	Ta.7882.2.S1_at	CA645408	-	-	1e+0	At2g04790	unknown protein	C.G.	S.X.	Please select
0.43	3e-117	422	Ta.7882.2.S1_a_at	CA645408	-	-	1e+0	At2g04790	unknown protein	C.G.	S.X.	Please select
0.17	2e-16	87	TaAffx.87119.1.S1_at	BF482631	-	-	6e+0	At5g58110	ATPase activator/ chaperone binding	C.G.	S.X.	Please select
0.17	2e-16	87	TaAffx.87119.1.S1_x_at	BF482631	-	-	6e+0	At5g58110	ATPase activator/ chaperone binding	C.G.	S.X.	Please select
0.13	7e-13	75	TaAffx.85354.1.S1_at	CA623468	-	-	1e+0	At5g35810	-	C.G.	S.X.	Please select
0.02	7e-13	75	Ta.28892.1.S1_s_at	CK198796	-	-	2e-11	At2g25070	protein phosphatase 2C, putative / PP2C, putative	C.G.	S.X.	Please select
0.04	7e-10	65	Ta.4012.2.S1_x_at	CK198232	-	-	4e-1	At4g29480	mitochondrial ATP synthase g subunit family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	34	Arabidopsis thaliana	At4g16750	827379	DRE-binding transcription factor, putative	encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e-4	48	Glycine max	Gma.4548.1.S1_at	BI967918	cold-regulated protein	-	2e+0	At4g15740	C2 domain-containing protein	C.G.	S.X.	Please select
0.11	5e-12	71	Hordeum vulgare	Contig12807_at	Contig12807	-	-	3e+0	At3g14595	unknown protein	C.G.	S.X.	Please select
0.12	1e-12	75	Oryza sativa	Os01g0934100	AK100995.1	-	C2 domain containing protein	7e-1	At5g62720	integral membrane HPP family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	3e+0	34	Populus trichocarpa	PtpAffx.92178.2.S1_s_at	CV271561	hypothetical protein	-	4e+0	At5g60680	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	1e+1	30	Vitis vinifera	1610294_at	CF373126	-	-	4e-13	At4g25835	AAA-type ATPase family protein	C.G.	S.X.	Please select
0.03	4e+0	32	Zea mays	ZmAffx.1177.1.S1_at	AW927462	-	-	7e-2	At1g04445	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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