Gene omics information

Query gene ID	Ta.7781.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	72.4	Ta.7781.1.A1_at	BQ160673	-	-	8e+0	At5g61220	complex 1 family protein / LVR family protein	S.X.	H.G.	Please select
0.73	89.1	Ta.9925.2.S1_x_at	BJ234804	-	-	7e-1	At5g42232	-	S.X.	H.G.	Please select
0.73	89.1	Ta.9925.2.S1_at	BJ234804	-	-	7e-1	At5g42232	-	S.X.	H.G.	Please select
0.56	78.6	TaAffx.71607.1.A1_at	CK208297	-	-	2e+1	At3g14670	unknown protein	S.X.	H.G.	Please select
0.50	72.4	Ta.9925.1.A1_a_at	BE516413	-	-	1e+1	At5g14920	gibberellin-regulated family protein	S.X.	H.G.	Please select
0.42	60.9	Ta.12753.1.S1_at	CD926424	-	-	5e+0	At1g18130	tRNA synthetase-related / tRNA ligase-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.9	98.4	GSM138171	genotype C31 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.1	98.1	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
5.8	97.9	GSM138187	genotype F38b developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.6	97.8	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.7	97.1	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.6	97.0	GSM138198	genotype C22 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.3	96.7	GSM111198	genotype A77 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.1	96.4	GSM111190	genotype G32 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.1	96.4	GSM138156	genotype DH91 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.0	96.3	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e-1	36	Ta.8094.2.S1_at	BQ171910	-	-	1e-2	At1g09390	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.106828.1.S1_at	CA710845	-	-	3e+0	At4g12710	armadillo/beta-catenin repeat family protein	C.G.	S.X.	Please select
0.02	2e+0	32	Ta.4974.1.S1_at	CA626148	-	-	8e-16	At1g13270	MAP1C (METHIONINE AMINOPEPTIDASE 1B)	C.G.	S.X.	Please select
0.03	2e+0	32	Ta.408.1.A1_at	BG905348	-	-	2e+0	At1g06500	unknown protein	C.G.	S.X.	Please select
0.04	8e+0	30	TaAffx.84136.1.S1_at	CA643981	-	-	2e+1	At1g36390	co-chaperone grpE family protein	C.G.	S.X.	Please select
0.04	8e+0	30	TaAffx.84212.1.S1_at	CA642301	-	-	4e+0	At4g07932	unknown protein	C.G.	S.X.	Please select
0.04	8e+0	30	TaAffx.80412.1.S1_at	CA697154	-	-	2e+1	At5g27910	NF-YC8 (NUCLEAR FACTOR Y, SUBUNIT C8)	C.G.	S.X.	Please select
0.04	8e+0	30	TaAffx.77871.1.S1_at	CA741469	-	-	4e+0	At1g60983	SCRL8 (SCR-Like 8)	C.G.	S.X.	Please select
0.05	8e+0	30	TaAffx.70796.1.A1_at	BQ168902	-	-	1e+1	At5g63000	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	8e+0	30	Arabidopsis thaliana	At5g61220	836243	complex 1 family protein / LVR family protein	F:catalytic activity;P:unknown;C:unknown;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e+0	32	Glycine max	Gma.12994.1.A1_at	CD394804	-	-	2e-1	At4g16195	self-incompatibility protein-related	C.G.	S.X.	Please select
0.04	2e-1	34	Hordeum vulgare	HVSMEk0011G17r2_at	HVSMEk0011G17r2	-	-	4e+0	At5g42504	unknown protein	C.G.	S.X.	Please select
0.09	1e-12	73	Oryza sativa	Os12g0599800	AK111139.1	-	Hypothetical protein	5e-1	At3g56110	PRA1.B1 (PRENYLATED RAB ACCEPTOR 1.B1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	7e-1	34	Populus trichocarpa	Ptp.1824.1.A1_at	CV255248	-	-	4e+0	At4g29070	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	2e-1	34	Vitis vinifera	1618771_s_at	CD715283	hypothetical protein LOC100262843	-	3e-4	At1g25560	TEM1 (TEMPRANILLO 1)	C.G.	S.X.	Please select
0.05	9e-1	32	Zea mays	Zm.11634.1.A1_at	BM379464	Hypothetical protein LOC100192517	-	3e+0	At4g38570	PIS2 (PROBABLE CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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