Gene omics information

Query gene ID	Ta.7699.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.62	82.3	Ta.7699.1.S1_at	BJ277130	-	-	4e-2	At1g22990	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	S.X.	H.G.	Please select
0.67	86.3	Ta.19463.1.S1_at	CA652153	-	-	2e+0	At1g20900	ESC (ESCAROLA)	S.X.	H.G.	Please select
0.55	76.8	Ta.17378.1.S1_at	CA484005	-	-	7e-3	At5g44210	ERF9 (ERF DOMAIN PROTEIN 9)	S.X.	H.G.	Please select
0.52	73.7	Ta.13277.1.A1_at	BQ169503	-	-	5e+0	At3g53610	ATRAB8	S.X.	H.G.	Please select
0.50	72.4	Ta.2882.1.S1_s_at	AF181661.1	EF-hand Ca2+-binding protein CCD1	-	9e-2	At5g26720	unknown protein	S.X.	H.G.	Please select
0.48	69.0	TaAffx.14385.1.S1_at	BF200382	-	-	5e-7	At5g67420	LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37)	S.X.	H.G.	Please select
0.47	67.9	Ta.7143.1.S1_x_at	BJ316053	-	-	2e+1	At5g60840	unknown protein	S.X.	H.G.	Please select
0.45	65.2	TaAffx.48658.1.S1_s_at	BJ318495	-	-	2e+0	At5g17900	-	S.X.	H.G.	Please select
0.44	64.5	Ta.9239.1.A1_at	CD937104	-	-	2e+1	At5g06210	RNA-binding protein, putative	S.X.	H.G.	Please select
0.44	64.5	Ta.9239.1.A1_x_at	CD937104	-	-	2e+1	At5g06210	RNA-binding protein, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
24.4	99.8	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
21.5	99.7	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
16.4	99.6	GSM138200	genotype F48 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
15.4	99.6	GSM138184	genotype C25 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.6	99.2	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
9.9	99.1	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.1	98.8	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
6.7	98.4	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.5	98.3	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.2	98.1	GSM138198	genotype C22 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.99	0	1937	Ta.7699.1.S1_x_at	BJ277130	-	-	4e-2	At1g22990	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	C.G.	S.X.	Please select
0.30	1e-76	287	TaAffx.43402.1.A1_at	BQ169023	-	-	1e+1	At5g05830	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.09	1e-14	81	TaAffx.40.1.S1_at	AJ615341	-	-	8e-5	At1g22990	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	C.G.	S.X.	Please select
0.08	2e-10	67	TaAffx.4762.1.S1_at	CA732666	-	-	7e+0	At5g40645	nitrate-responsive NOI protein, putative	C.G.	S.X.	Please select
0.05	7e-10	65	Ta.9697.1.S1_s_at	BJ242494	-	-	1e-3	At1g22990	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	C.G.	S.X.	Please select
0.05	7e-10	65	Ta.1107.1.A1_at	BE416288	-	-	5e-3	At1g22990	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	C.G.	S.X.	Please select
0.03	2e-7	57	Ta.4941.1.S1_at	BT009077.1	-	-	5e-4	At5g66110	metal ion binding	C.G.	S.X.	Please select
0.03	2e-4	48	TaAffx.85895.1.S1_at	CA618644	-	-	4e-2	At2g36950	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.04	2e-4	48	Ta.13077.1.A1_at	CD490661	-	-	2e-2	At5g66110	metal ion binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e-2	40	Arabidopsis thaliana	At1g22990	838907	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;PFM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e-1	38	Glycine max	Gma.16385.1.A1_at	BE657757	-	-	1e+0	At5g56600	PRF3 (PROFILIN 3)	C.G.	S.X.	Please select
0.67	0	634	Hordeum vulgare	Contig11037_at	Contig11037	-	-	7e+0	At5g23908	unknown protein	C.G.	S.X.	Please select
0.27	2e-39	165	Oryza sativa	Os03g0152000	AK102357.1	-	-	4e-2	At5g24580	copper-binding family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	8e-1	36	Populus trichocarpa	PtpAffx.210669.1.S1_x_at	pmrna20922	-	-	1e-22	At5g50740	metal ion binding	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	3e-3	42	Vitis vinifera	1621047_at	CB968782	-	-	1e+0	At1g71050	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	C.G.	S.X.	Please select
0.13	5e-15	81	Zea mays	Zm.2647.1.A1_at	BG268724	hypothetical protein LOC100192886	-	1e-4	At1g22990	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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