Gene omics information

Query gene ID	Ta.7590.2.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	90.8	Ta.7590.2.S1_a_at	CK215141	-	-	9e-8	At5g27490	integral membrane Yip1 family protein	S.X.	H.G.	Please select
0.61	82.0	Ta.14073.1.S1_x_at	BJ228415	-	-	5e-36	At1g09430	ACLA-3	S.X.	H.G.	Please select
0.50	72.4	Ta.14073.1.S1_at	BJ228415	-	-	5e-36	At1g09430	ACLA-3	S.X.	H.G.	Please select
0.44	64.5	Ta.16401.1.A1_s_at	BJ215044	-	-	2e-7	At4g02120	CTP synthase, putative / UTP--ammonia ligase, putative	S.X.	H.G.	Please select
0.27	35.6	Ta.9793.1.A1_at	BJ252593	-	-	9e-4	At5g24260	prolyl oligopeptidase family protein	S.X.	H.G.	Please select
0.18	21.0	Ta.6850.1.S1_at	BJ311627	-	-	8e-19	At5g52210	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.5	98.6	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.4	98.6	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.0	98.5	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.4	98.2	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.0	98.0	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.7	97.9	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.6	97.8	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.6	97.8	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.4	97.7	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.9	97.3	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	36	TaAffx.108359.1.S1_at	CA689197	-	-	1e+0	At5g11090	serine-rich protein-related	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.7316.1.S1_at	CA662318	-	-	1e+0	At1g33475	-	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.9715.1.A1_at	CK207424	-	-	3e-2	At5g22030	UBP8 (UBIQUITIN-SPECIFIC PROTEASE 8)	C.G.	S.X.	Please select
0.03	1e+0	34	Ta.5618.1.A1_at	BQ166664	-	-	5e+0	At5g63952	unknown protein	C.G.	S.X.	Please select
0.03	5e+0	32	TaAffx.81355.1.S1_at	CA687111	-	-	3e+0	At5g28660	-	C.G.	S.X.	Please select
0.03	5e+0	32	TaAffx.59330.1.S1_at	CA603132	-	-	1e+0	At3g23490	CYN (CYANASE)	C.G.	S.X.	Please select
0.03	5e+0	32	TaAffx.112101.1.S1_at	CA627076	-	-	1e-9	At1g20090	ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)	C.G.	S.X.	Please select
0.02	5e+0	32	Ta.7457.1.S1_at	CK166374	-	-	3e+0	Atmg01260	-	C.G.	S.X.	Please select
0.02	5e+0	32	Ta.6561.2.S1_at	CD901431	-	-	6e-1	At3g63250	HMT2 (HOMOCYSTEINE METHYLTRANSFERASE 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	9e-8	57	Arabidopsis thaliana	At5g27490	832808	integral membrane Yip1 family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	Gma.12826.1.A1_at	CD391629	-	-	1e+0	At2g36485	-	C.G.	S.X.	Please select
0.37	2e-118	424	Hordeum vulgare	Contig9005_at	Contig9005	-	-	1e-14	At3g05280	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.21	6e-63	242	Oryza sativa	Os01g0610500	AK105469.1	-	Conserved hypothetical protein	1e-14	At3g05280	integral membrane Yip1 family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e-1	38	Populus trichocarpa	PtpAffx.675.5.S1_at	CF227425	hypothetical protein	-	4e-45	At5g27490	integral membrane Yip1 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.10	4e-4	44	Vitis vinifera	1619947_at	BQ794365	hypothetical protein LOC100266603	-	5e-6	At3g05280	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.29	5e-63	240	Zea mays	Zm.14670.1.S1_at	BM381336	hypothetical protein LOC100193527	-	8e-5	At3g05280	integral membrane Yip1 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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