CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.7585.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.7585.1.S1_at CK206711 - - 3e-9 At1g72710 CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2) S.X. H.G.
0.60 81.0 Ta.7311.1.S1_at CK196830 - - 2e-1 At2g45140 PVA12 (PLANT VAP HOMOLOG 12) S.X. H.G.
0.57 79.2 Ta.7608.1.S1_x_at CD452795 - - 7e-5 At2g17200 ubiquitin family protein S.X. H.G.
0.57 79.2 Ta.9607.1.A1_a_at CA708572 - - 5e+0 At5g24510 60s acidic ribosomal protein P1, putative S.X. H.G.
0.40 58.4 Ta.95.1.S1_at M90663.1 - - 4e-32 At2g30110 ATUBA1 S.X. H.G.
0.25 32.1 Ta.6346.1.S1_at CK169170 - - 3e-63 At5g06600 UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.2 94.8 GSM139914 Anther pre-meiosis rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2 94.8 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
3.2 94.8 GSM138176 genotype A40 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.0 94.3 GSM314276 tissue type: pistil, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
2.9 94.0 GSM111251 genotype A35 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
2.8 93.6 GSM138201 genotype F48 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.7 93.3 GSM314277 tissue type: pistil, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
2.6 92.9 GSM139926 Anther tetrads rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6 92.9 GSM139928 Anther immature pollen rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6 92.9 GSM111179 genotype DH95 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.33 5e-150 531 Ta.7585.2.S1_a_at CA661364 - - 2e-20 At4g08800 protein kinase, putative C.G. S.X.
0.32 1e-88 327 TaAffx.83052.1.S1_at CA662657 - - 5e-15 At4g08800 protein kinase, putative C.G. S.X.
0.14 1e-33 145 TaAffx.24603.1.S1_at CA716223 - - 1e-11 At5g57015 ckl12 (Casein Kinase I-like 12) C.G. S.X.
0.12 1e-24 115 Ta.23917.3.S1_x_at CN012788 Type 1 non-specific lipid transfer protein precursor - 3e-1 At5g62860 F-box family protein-related C.G. S.X.
0.04 5e-8 59 Ta.14567.1.S1_at BJ321982 - - 1e-15 At5g44100 ckl7 (Casein Kinase I-like 7) C.G. S.X.
0.04 5e-8 59 Ta.1337.2.S1_x_at CA632594 - - 5e+0 At5g51310 gibberellin 20-oxidase-related C.G. S.X.
0.04 5e-8 59 Ta.1337.1.S1_x_at CK164223 - - 2e+0 At5g08120 MBP2C (MICROTUBULE BINDING PROTEIN 2C) C.G. S.X.
0.04 1e-5 52 TaAffx.98921.1.A1_at CK215337 - - 1e+0 At5g43570 serine-type endopeptidase inhibitor C.G. S.X.
0.06 8e-4 46 Ta.28386.1.A1_at CA630735 - - 4e+0 At4g12545 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 3e-9 63 Arabidopsis thaliana At1g72710 843603 CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2) Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus. - - - C.G. S.X.
0.07 6e-2 40 Glycine max GmaAffx.45359.2.S1_at BQ453165 - - 1e-60 At4g28540 CKL6 (CASEIN KINASE I-LIKE 6) C.G. S.X.
0.54 0 1229 Hordeum vulgare Contig6177_at Contig6177 - - 6e-95 At1g72710 CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2) C.G. S.X.
0.42 7e-135 482 Oryza sativa Os.11642.1.S1_at - - - 0 C.G. S.X.
0.07 1e-9 65 Populus trichocarpa PtpAffx.5604.1.S1_at CV242218 hypothetical protein - 1e-114 At4g26100 CK1 (CASEIN KINASE 1) C.G. S.X.
0.09 1e-14 79 Vitis vinifera 1622257_at CF210952 hypothetical protein LOC100261234 - 5e-23 At1g72710 CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2) C.G. S.X.
0.32 8e-42 171 Zea mays Zm.13771.1.A1_at AY105545.1 hypothetical protein LOC100216812 - 1e-17 At1g72710 CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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