Gene omics information

Query gene ID Ta.7506.2.S1_a_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8393.4Ta.7506.2.S1_a_atBJ267303--5e-15At1g27650ATU2AF35AS.X.H.G.
0.6081.0TaAffx.87003.1.S1_s_atCA597427--4e-3At4g19150ankyrin repeat family proteinS.X.H.G.
0.5678.6Ta.28206.3.S1_a_atCA661286--2e-2At3g02220unknown proteinS.X.H.G.
0.5576.8Ta.8142.1.S1_atBQ752849--3e-15At1g61620phosphoinositide bindingS.X.H.G.
0.5072.4Ta.2207.2.S1_a_atCA612248--5e-25At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)S.X.H.G.
0.4058.4TaAffx.77390.1.S1_atCD893386histone deacetylase-1e-19At5g63110HDA6 (HISTONE DEACETYLASE 6)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.298.5GSM298073Crown tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
5.897.9GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
5.797.9GSM298074Crown tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
5.297.5GSM298071Crown tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
5.297.5GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
5.197.5GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
5.097.4GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
4.897.2GSM298088Crown tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
4.897.2GSM298087Crown tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
4.697.0GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.550916Ta.7506.1.S1_atCK216196--1e-20At1g27650ATU2AF35AC.G.S.X.
0.367e-39161Ta.6597.1.S1_atCA662353--5e-14At1g27650ATU2AF35AC.G.S.X.
0.035e+032TaAffx.71584.1.A1_atCK216531--1e+0At2g41180sigA-binding protein-relatedC.G.S.X.
0.035e+032TaAffx.65356.1.S1_atBJ249131--7e-5At3g54320WRI1 (WRINKLED 1)C.G.S.X.
0.035e+032TaAffx.59660.1.S1_atCA597384--1e-3At5g21950hydrolase, alpha/beta fold family proteinC.G.S.X.
0.025e+032TaAffx.19945.1.S1_atCD916835--2e-1At1g61920unknown proteinC.G.S.X.
0.035e+032TaAffx.106110.2.S1_atCA665261--4e+0At1g58420-C.G.S.X.
0.015e+032Ta.7134.1.S1_atCK208999--6e-2At1g50940ETFALPHA (electron transfer flavoprotein alpha)C.G.S.X.
0.015e+032Ta.16760.1.S1_atCA611994--6e-48At5g52920PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.355e-1581Arabidopsis thalianaAt1g27650839657ATU2AF35AU2 auxiliary factor small subunit. The atU2AF35a protein and its homolog, atU2AF35b, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.---C.G.S.X.
0.207e-961Glycine maxGmaAffx.56431.1.S1_x_atBU761499--1e-9At1g27650ATU2AF35AC.G.S.X.
0.580950Hordeum vulgareContig4648_atContig4648--2e-10At5g42820U2AF35BC.G.S.X.
0.399e-80297Oryza sativaOs05g0564200AK070198.1-U2 snRNP auxiliary factor, small subunit2e-22At1g27650ATU2AF35AC.G.S.X.
0.392e-27123Populus trichocarpaPtpAffx.201516.1.S1_atpmrna2985hypothetical protein-5e-69At1g27650ATU2AF35AC.G.S.X.
0.172e-1167Vitis vinifera1616583_atCF403794hypothetical protein LOC100266834-3e-19At1g27650ATU2AF35AC.G.S.X.
0.354e-66250Zea maysZm.4357.3.S1_atAY104397.1hypothetical protein LOC100191858 /// splicing factor U2af 38 kDa subunit-3e-22At1g27650ATU2AF35AC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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