Gene omics information

Query gene ID	Ta.7285.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.2	Ta.7285.1.S1_at	BJ276616	-	-	9e-18	At2g34160	nucleic acid binding	S.X.	H.G.	Please select
0.80	92.2	Ta.10082.3.A1_s_at	BJ261535	-	-	7e-2	At1g80245	-	S.X.	H.G.	Please select
0.61	82.0	Ta.2745.3.A1_at	BJ320799	-	-	1e+0	At5g33370	GDSL-motif lipase/hydrolase family protein	S.X.	H.G.	Please select
0.50	72.4	Ta.8066.2.A1_at	CA640037	-	-	1e+0	At1g68585	unknown protein	S.X.	H.G.	Please select
0.37	53.0	Ta.6784.1.S1_at	CK151755	-	-	6e-85	At1g21690	emb1968 (embryo defective 1968)	S.X.	H.G.	Please select
0.35	49.8	Ta.9549.2.S1_s_at	BQ743523	-	-	1e+0	At5g40570	surfeit locus protein 2 family protein / SURF2 family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.8	99.3	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
11.3	99.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
9.5	99.1	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
8.5	98.9	GSM298093	Crown tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
8.1	98.8	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
8.0	98.8	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.6	98.7	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.6	98.7	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.5	98.3	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.7	97.9	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.31	8e-80	297	Ta.13996.1.S1_at	CK152276	-	-	2e-15	At2g34160	nucleic acid binding	C.G.	S.X.	Please select
0.17	3e-39	163	Ta.10719.1.S1_x_at	BQ166351	-	-	2e-12	At1g29250	nucleic acid binding	C.G.	S.X.	Please select
0.17	3e-39	163	Ta.10719.1.S1_s_at	BQ166351	-	-	2e-12	At1g29250	nucleic acid binding	C.G.	S.X.	Please select
0.16	1e-38	161	TaAffx.131556.1.S1_at	BE516329	-	-	3e-11	At1g29250	nucleic acid binding	C.G.	S.X.	Please select
0.17	5e-38	159	TaAffx.8805.1.S1_at	CA619968	-	-	7e-14	At1g29250	nucleic acid binding	C.G.	S.X.	Please select
0.12	5e-32	139	Ta.3643.1.S1_at	BJ221428	-	-	1e-16	At1g29250	nucleic acid binding	C.G.	S.X.	Please select
0.13	7e-28	125	TaAffx.112199.1.S1_at	CA626124	-	-	2e-7	At1g29250	nucleic acid binding	C.G.	S.X.	Please select
0.03	3e-2	40	TaAffx.114324.1.S1_at	CA594933	-	-	2e-1	At3g14670	unknown protein	C.G.	S.X.	Please select
0.01	1e-1	38	Ta.1648.2.A1_at	CA606613	-	-	8e-23	At3g18190	chaperonin, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.26	9e-18	91	Arabidopsis thaliana	At2g34160	817977	nucleic acid binding	F:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.26	3e-37	157	Glycine max	Gma.10674.1.S1_s_at	CD395933	-	-	4e-17	At2g34160	nucleic acid binding	C.G.	S.X.	Please select
0.77	0	1063	Hordeum vulgare	Contig7790_s_at	Contig7790	-	-	3e-11	At2g34160	nucleic acid binding	C.G.	S.X.	Please select
0.38	4e-105	383	Oryza sativa	Os02g0202500	AK062327.1	-	Conserved hypothetical protein	8e-24	At1g29250	nucleic acid binding	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.18	1e-17	91	Populus trichocarpa	Ptp.4243.1.S1_at	CV254595	hypothetical protein	-	1e-28	At1g29250	nucleic acid binding	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.28	2e-40	165	Vitis vinifera	1616959_a_at	CA817373	hypothetical protein LOC100268144	-	4e-41	At2g34160	nucleic acid binding	C.G.	S.X.	Please select
0.37	1e-95	349	Zea mays	Zm.12251.1.S1_at	AY104373.1	hypothetical protein LOC100275927	-	7e-18	At2g34160	nucleic acid binding	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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