Gene omics information

Query gene ID	Ta.7261.2.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.7261.2.A1_at	BJ309551	-	-	3e-1	At1g28960	ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15)	S.X.	H.G.	Please select
0.80	92.2	Ta.7261.2.A1_a_at	BJ309551	-	-	3e-1	At1g28960	ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15)	S.X.	H.G.	Please select
0.73	89.1	Ta.1964.1.S1_x_at	CD890475	-	-	2e+0	At3g13500	unknown protein	S.X.	H.G.	Please select
0.59	79.8	Ta.1964.3.S1_x_at	CK213330	-	-	2e+0	At3g13500	unknown protein	S.X.	H.G.	Please select
0.57	79.2	Ta.7649.2.S1_x_at	BJ321934	-	-	8e-5	At1g12410	CLP2 (CLP PROTEASE PROTEOLYTIC SUBUNIT 2)	S.X.	H.G.	Please select
0.47	67.9	Ta.13250.2.S1_x_at	CK158867	-	-	7e-4	At5g20720	CPN20 (CHAPERONIN 20)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
17.0	99.6	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
16.6	99.6	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
16.2	99.6	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
13.7	99.5	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
13.4	99.5	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.3	98.8	GSM343686	Wheat var. Kennedy_Fp inoculated_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.8	96.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM250893	TcLr34_3dpi_mock_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM250887	TcLr34_3dpi_mock_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8	93.6	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1182	Ta.7261.2.A1_a_at	BJ309551	-	-	3e-1	At1g28960	ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15)	C.G.	S.X.	Please select
0.50	1e-80	299	Ta.7261.1.S1_at	BJ216631	-	-	3e+0	At5g45410	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	36	TaAffx.97429.2.S1_at	CA648834	-	-	1e+0	At5g24190	-	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.27025.1.S1_at	BT008924.1	-	-	1e-2	At3g19300	protein kinase family protein	C.G.	S.X.	Please select
0.04	1e+0	34	TaAffx.112489.1.S1_at	CA623500	-	-	5e-1	At2g17705	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.30642.1.A1_at	BQ805349	hypothetical LOC543029	-	2e-30	At5g10200	binding	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.30642.1.S1_at	BQ805349	hypothetical LOC543029	-	2e-30	At5g10200	binding	C.G.	S.X.	Please select
0.03	5e+0	32	TaAffx.99224.1.A1_at	CK209191	-	-	3e-1	At5g65960	unknown protein	C.G.	S.X.	Please select
0.03	5e+0	32	TaAffx.59675.1.S1_at	CA597159	-	-	4e+0	At5g46873	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	36	Arabidopsis thaliana	At1g28960	839773	ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15)	F:hydrolase activity, CoA pyrophosphatase activity (sent to SF);P:biological_process unknown;C:mitochondrion;BOMFPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	34	Glycine max	GmaAffx.27790.1.S1_at	BI788009	-	-	5e-2	At2g23290	AtMYB70 (myb domain protein 70)	C.G.	S.X.	Please select
0.49	1e-119	428	Hordeum vulgare	Contig923_s_at	Contig923	-	-	9e-1	At3g57390	AGL18	C.G.	S.X.	Please select
0.03	6e-1	36	Oryza sativa	Os09g0555100	9637.m03263	-	Sulfotransferase family protein	4e+0	At3g23805	RALFL24 (ralf-like 24)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	4e-1	36	Populus trichocarpa	PtpAffx.215178.1.S1_s_at	pmrna29222	hypothetical protein	-	3e-120	Atmg00513	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	32	Vitis vinifera	1618810_at	CA814387	hypothetical LOC100255564	-	4e+0	At1g23660	unknown protein	C.G.	S.X.	Please select
0.03	5e-1	34	Zea mays	Zm.15666.1.A1_at	CA403557	INDETERMINATE-related protein 10	-	9e-1	At1g61795	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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