Gene omics information

Query gene ID	Ta.7143.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.7143.1.S1_x_at	BJ316053	-	-	2e+1	At5g60840	unknown protein	S.X.	H.G.	Please select
0.91	98.2	Ta.7143.2.S1_x_at	CK192888	-	-	2e+1	At5g19380	unknown protein	S.X.	H.G.	Please select
0.80	92.2	Ta.17378.1.S1_at	CA484005	-	-	7e-3	At5g44210	ERF9 (ERF DOMAIN PROTEIN 9)	S.X.	H.G.	Please select
0.73	89.1	Ta.7143.1.S1_a_at	BJ316053	-	-	2e+1	At5g60840	unknown protein	S.X.	H.G.	Please select
0.67	86.3	Ta.10520.1.S1_at	AL828817	-	-	2e-2	At4g29780	unknown protein	S.X.	H.G.	Please select
0.40	58.4	Ta.2882.1.S1_at	AF181661.1	EF-hand Ca2+-binding protein CCD1	-	9e-2	At5g26720	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
17.8	99.7	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
14.0	99.5	GSM138195	genotype J15 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
13.0	99.4	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
12.6	99.4	GSM138184	genotype C25 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
12.1	99.4	GSM138200	genotype F48 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
11.6	99.3	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
11.3	99.3	GSM138199	genotype C22 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.8	99.2	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
9.3	99.0	GSM138215	genotype A77 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.3	99.0	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	971	Ta.7143.1.S1_a_at	BJ316053	-	-	2e+1	At5g60840	unknown protein	C.G.	S.X.	Please select
0.33	4e-179	626	Ta.7143.2.S1_x_at	CK192888	-	-	2e+1	At5g19380	unknown protein	C.G.	S.X.	Please select
0.34	1e-95	349	Ta.7143.3.S1_a_at	CA730168	-	-	4e+0	At1g11700	unknown protein	C.G.	S.X.	Please select
0.08	8e-11	67	Ta.1729.2.A1_at	CA638996	-	-	4e+0	At4g32390	phosphate translocator-related	C.G.	S.X.	Please select
0.04	3e-7	56	Ta.10520.1.S1_at	AL828817	-	-	2e-2	At4g29780	unknown protein	C.G.	S.X.	Please select
0.02	7e-2	38	Ta.25559.1.S1_at	CD454108	-	-	4e-6	At5g51750	ATSBT1.3 (ARABIDOPSIS THALIANA SUBTILASE 1.3)	C.G.	S.X.	Please select
0.03	7e-2	38	Ta.16145.1.A1_at	CK207630	-	-	6e+0	At4g38680	GRP2 (GLYCINE RICH PROTEIN 2)	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.5301.1.S1_at	BJ280396	-	-	7e-3	At4g19690	IRT1 (iron-regulated transporter 1)	C.G.	S.X.	Please select
0.04	1e+0	34	TaAffx.86947.1.S1_at	BJ223693	-	-	4e+0	At4g24960	ATHVA22D	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+1	30	Arabidopsis thaliana	At5g60840	836205	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	4e-1	36	Glycine max	PsAffx.C44000035_at	PsAffx.C44000035	-	-	2e+0	At2g40085	unknown protein	C.G.	S.X.	Please select
0.11	8e-3	40	Hordeum vulgare	HVSMEn0012H13r2_at	HVSMEn0012H13r2	-	-	5e-2	At5g63280	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.14	7e-22	105	Oryza sativa	OsAffx.26795.2.S1_x_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	6e+0	32	Populus trichocarpa	PtpAffx.223141.1.S1_at	pmrna40995	hypothetical protein	-	2e+0	At5g20635	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	30	Vitis vinifera	1609676_at	CF415727	hypothetical protein LOC100247810	-	6e-2	At4g10650	GTP binding	C.G.	S.X.	Please select
0.04	2e-3	42	Zea mays	Zm.11770.1.A1_at	BM380607	hypothetical protein LOC100191551	-	9e-5	At5g12010	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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