Gene omics information

Query gene ID	Ta.6968.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.82	92.7	Ta.6968.1.S1_at	CK196001	-	-	1e-45	At3g53610	ATRAB8	S.X.	H.G.	Please select
0.35	49.8	Ta.29525.1.S1_at	CA691279	-	-	2e-3	At1g79390	unknown protein	S.X.	H.G.	Please select
0.31	42.7	Ta.12554.1.S1_a_at	CD909877	-	-	1e+0	At2g09970	unknown protein	S.X.	H.G.	Please select
0.26	33.6	Ta.6428.1.S1_s_at	BG608133	-	-	2e-5	At5g47620	heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative	S.X.	H.G.	Please select
0.25	32.1	Ta.2816.2.S1_a_at	CA747268	-	-	4e+0	At4g18650	transcription factor-related	S.X.	H.G.	Please select
0.21	25.5	Ta.7156.1.S1_at	CK166080	-	-	4e+0	At1g31240	DNA binding	S.X.	H.G.	Please select
0.19	22.4	Ta.11361.1.S1_at	CD932339	-	-	6e-1	At5g48680	sterile alpha motif (SAM) domain-containing protein	S.X.	H.G.	Please select
0.17	19.8	Ta.7457.1.S1_at	CK166374	-	-	3e+0	Atmg01260	-	S.X.	H.G.	Please select
0.16	18.2	Ta.8245.1.S1_at	CD922906	-	-	2e-35	At1g04810	26S proteasome regulatory subunit, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.4	96.8	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
3.9	96.1	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.0	94.3	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.53	0	817	Ta.6968.2.S1_a_at	CA604796	-	-	2e-33	At5g03520	ATRAB8C	C.G.	S.X.	Please select
0.41	0	642	Ta.23107.1.S1_a_at	CK156982	-	-	1e-51	At3g53610	ATRAB8	C.G.	S.X.	Please select
0.42	4e-135	482	Ta.6968.3.S1_x_at	CA630440	-	-	1e-12	At5g03520	ATRAB8C	C.G.	S.X.	Please select
0.42	4e-135	482	Ta.6968.3.S1_at	CA630440	-	-	1e-12	At5g03520	ATRAB8C	C.G.	S.X.	Please select
0.26	8e-87	321	Ta.23107.3.S1_a_at	CA655366	-	-	1e-28	At3g46060	ATRAB8A	C.G.	S.X.	Please select
0.26	8e-87	321	Ta.23107.3.S1_x_at	CA655366	-	-	1e-28	At3g46060	ATRAB8A	C.G.	S.X.	Please select
0.36	1e-76	287	Ta.17113.1.S1_at	CA617930	-	-	3e-48	At5g59840	Ras-related GTP-binding family protein	C.G.	S.X.	Please select
0.20	1e-36	155	TaAffx.83759.1.S1_at	CA651862	-	-	2e-2	At5g59840	Ras-related GTP-binding family protein	C.G.	S.X.	Please select
0.12	2e-22	107	TaAffx.23406.1.S1_at	CA735527	-	-	9e-4	At3g53610	ATRAB8	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.41	1e-45	184	Arabidopsis thaliana	At3g53610	824529	ATRAB8	GTPase AtRAB8 (atrab8)	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.42	1e-61	238	Glycine max	GmaAffx.91170.1.S1_x_at	CF806895	-	-	5e-58	At3g46060	ATRAB8A	C.G.	S.X.	Please select
0.79	0	1312	Hordeum vulgare	Contig3337_s_at	Contig3337	-	-	5e-50	At5g59840	Ras-related GTP-binding family protein	C.G.	S.X.	Please select
0.48	4e-56	220	Oryza sativa	Os.12233.2.S1_x_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.38	4e-83	309	Populus trichocarpa	PtpAffx.14585.3.S1_at	BU893135	hypothetical protein	-	2e-133	At3g46060	ATRAB8A	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.38	7e-66	250	Vitis vinifera	1620541_at	CF212449	hypothetical protein LOC100257177	-	5e-75	At3g53610	ATRAB8	C.G.	S.X.	Please select
0.38	5e-129	460	Zea mays	Zm.2826.1.S1_at	BM333443	hypothetical protein LOC100192989	-	2e-62	At3g46060	ATRAB8A	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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