Gene omics information

Query gene ID	Ta.6945.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	83.1	Ta.6945.1.A1_at	BJ319268	-	-	3e+0	At3g09940	MDHAR (MONODEHYDROASCORBATE REDUCTASE)	S.X.	H.G.	Please select
0.44	64.5	Ta.3322.3.S1_a_at	CA649562	-	-	2e-5	At4g18030	dehydration-responsive family protein	S.X.	H.G.	Please select
0.25	32.1	Ta.6945.1.A1_a_at	BJ319268	-	-	3e+0	At3g09940	MDHAR (MONODEHYDROASCORBATE REDUCTASE)	S.X.	H.G.	Please select
0.23	29.0	Ta.3322.1.S1_s_at	CK208679	-	-	4e-50	At1g26850	dehydration-responsive family protein	S.X.	H.G.	Please select
0.17	19.8	Ta.10569.1.A1_at	CK208173	-	-	1e+0	At5g18590	kelch repeat-containing protein	S.X.	H.G.	Please select
0.12	13.3	Ta.16760.1.S1_at	CA611994	-	-	6e-48	At5g52920	PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.1	98.8	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.5	98.3	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.4	98.2	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.4	98.2	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.9	98.0	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.8	97.9	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.6	97.8	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.3	97.6	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.3	97.6	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.2	97.5	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.94	0	2250	Ta.6945.1.A1_a_at	BJ319268	-	-	3e+0	At3g09940	MDHAR (MONODEHYDROASCORBATE REDUCTASE)	C.G.	S.X.	Please select
0.05	1e-20	101	Ta.6945.3.A1_at	BJ215706	-	-	4e+0	At1g66230	MYB20 (myb domain protein 20)	C.G.	S.X.	Please select
0.03	9e-16	85	Ta.12621.1.S1_at	BQ170763	-	-	3e+0	At1g52615	unknown gene	C.G.	S.X.	Please select
0.04	8e-10	65	Ta.7028.1.A1_at	BJ314138	-	-	8e+0	At5g14200	3-isopropylmalate dehydrogenase, chloroplast, putative	C.G.	S.X.	Please select
0.03	2e-7	57	Ta.30788.1.S1_at	CK156695	-	-	2e+0	At3g48140	senescence-associated protein, putative	C.G.	S.X.	Please select
0.03	1e-5	52	Ta.9702.1.S1_at	CN012529	-	-	1e+1	At4g00460	Rho guanyl-nucleotide exchange factor	C.G.	S.X.	Please select
0.04	1e-5	52	Ta.9601.1.S1_at	BJ278974	-	-	2e-55	At4g14320	60S ribosomal protein L36a/L44 (RPL36aB)	C.G.	S.X.	Please select
0.04	1e-5	52	Ta.9601.1.S1_x_at	BJ278974	-	-	2e-55	At4g14320	60S ribosomal protein L36a/L44 (RPL36aB)	C.G.	S.X.	Please select
0.02	1e-5	52	Ta.10567.1.S1_at	CD932356	-	-	2e-11	At5g13530	KEG (KEEP ON GOING)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	3e+0	34	Arabidopsis thaliana	At3g09940	820155	MDHAR (MONODEHYDROASCORBATE REDUCTASE)	Encodes a member of the monodehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	2e-2	42	Glycine max	GmaAffx.89523.1.A1_at	CK606544	-	-	7e-6	At5g18030	auxin-responsive protein, putative	C.G.	S.X.	Please select
0.80	0	1699	Hordeum vulgare	Contig11718_at	Contig11718	-	-	2e-1	At1g28340	AtRLP4 (Receptor Like Protein 4)	C.G.	S.X.	Please select
0.41	5e-148	525	Oryza sativa	Os07g0501800	AK102299.1	-	Hypothetical protein	3e-4	At1g28340	AtRLP4 (Receptor Like Protein 4)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e+0	36	Populus trichocarpa	PtpAffx.203875.1.S1_at	pmrna7657	hypothetical protein	-	1e-21	At1g28340	AtRLP4 (Receptor Like Protein 4)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	1e+1	30	Vitis vinifera	1620832_at	CB345892	-	-	1e+1	At1g52440	-	C.G.	S.X.	Please select
0.13	3e-84	311	Zea mays	Zm.344.1.A1_at	AI834592	OCL4 protein	-	2e-6	At5g46880	HB-7 (HOMEOBOX-7)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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