CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.6868.2.A1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.74 89.4 Ta.6868.2.A1_x_at BQ168367 - - 4e-23 At1g56350 peptide chain release factor, putative S.X. H.G.
0.41 59.6 Ta.6868.1.A1_a_at BJ310616 - - 2e-9 At1g56350 peptide chain release factor, putative S.X. H.G.
0.36 51.9 Ta.14960.1.S1_at BJ251751 - - 4e-30 At1g03910 - S.X. H.G.
0.25 32.1 Ta.1633.1.S1_a_at BJ274459 - - 3e-9 At5g53800 unknown protein S.X. H.G.
0.23 29.0 Ta.25336.1.A1_at CD454265 - - 1e-7 At5g66030 ATGRIP S.X. H.G.
0.11 12.4 Ta.7128.1.S1_at BQ802073 - - 6e-8 At5g60160 aspartyl aminopeptidase, putative S.X. H.G.
0.08 9.4 Ta.3718.2.S1_at CD895847 - - 4e-52 At2g26140 ftsh4 (FtsH protease 4) S.X. H.G.
0.04 5.8 Ta.6256.1.S1_at BJ265629 - - 2e-7 At4g11120 translation elongation factor Ts (EF-Ts), putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.2 99.3 GSM298087 Crown tissue of Solstice at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
10.2 99.2 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
5.2 97.5 GSM314276 tissue type: pistil, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
4.8 97.2 GSM139929 Anther immature pollen rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.7 97.1 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
4.7 97.1 GSM298075 Crown tissue of Paragon at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
4.1 96.4 GSM139920 Anther diplotene-anaphaseI rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1 96.4 GSM139918 Anther leptotene-pachytene rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.9 96.1 GSM139917 Anther leptotene-pachytene rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.9 96.1 GSM298076 Crown tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.44 1e-115 416 Ta.6868.1.A1_a_at BJ310616 - - 2e-9 At1g56350 peptide chain release factor, putative C.G. S.X.
0.46 4e-57 222 TaAffx.86846.1.S1_at CA599834 - - 4e+0 At2g20618 - C.G. S.X.
0.04 1e-1 38 TaAffx.111026.1.S1_at CA649591 - - 5e-2 At1g56350 peptide chain release factor, putative C.G. S.X.
0.02 2e+0 34 TaAffx.56548.1.S1_at CA649270 - - 4e+0 At4g37070 patatin, putative C.G. S.X.
0.02 8e+0 32 TaAffx.58987.1.S1_at CA610580 - - 9e-1 At1g37140 MCT1 (mei2 C-Terminal RRM only like 1) C.G. S.X.
0.02 8e+0 32 TaAffx.32150.1.S1_at CA600133 - - 7e-2 At1g79790 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.02 8e+0 32 TaAffx.108581.1.S1_at CA686713 - - 4e+0 At4g33560 unknown protein C.G. S.X.
0.02 8e+0 32 Ta.2989.1.A1_at BJ217279 - - 1e+0 At5g47630 mtACP3 (mitochondrial acyl carrier protein 3) C.G. S.X.
0.02 8e+0 32 Ta.14122.1.S1_at BQ166287 - - 1e-35 At3g53030 SRPK4 (Ser/Arg-rich protein kinase 4) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 4e-23 109 Arabidopsis thaliana At1g56350 842089 peptide chain release factor, putative F:translation release factor activity, codon specific, translation release factor activity;P:translational termination;C:cytoplasm;OBMFPV - - - C.G. S.X.
0.03 3e+0 34 Glycine max GmaAffx.93609.1.S1_at CF809334 - - 1e-37 At3g02290 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.46 0 886 Hordeum vulgare Contig17141_at Contig17141 - - 1e-26 At1g56350 peptide chain release factor, putative C.G. S.X.
0.27 7e-122 438 Oryza sativa Os03g0305700 AK073807.1 - Peptide chain release factor 2 5e-24 At1g56350 peptide chain release factor, putative C.G. S.X.
0.15 2e-16 87 Populus trichocarpa PtpAffx.210857.1.S1_at pmrna21321 hypothetical protein - 1e-38 At1g56350 peptide chain release factor, putative C.G. S.X.
0.03 9e+0 30 Vitis vinifera 1622487_at CF215822 hypothetical protein LOC100260885 - 5e-21 At1g09610 unknown protein C.G. S.X.
0.23 9e-47 186 Zea mays Zm.4714.1.A1_at AI738144 peptide chain release factor 2 - 3e-14 At1g56350 peptide chain release factor, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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