Gene omics information

Query gene ID	Ta.6850.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.55	76.8	Ta.6850.1.S1_at	BJ311627	-	-	8e-19	At5g52210	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)	S.X.	H.G.	Please select
0.50	72.4	Ta.10486.1.S1_at	BQ172361	-	-	1e-2	At4g10010	protein kinase family protein	S.X.	H.G.	Please select
0.50	72.4	Ta.5090.1.S1_x_at	CK168310	-	-	4e-25	At5g11980	conserved oligomeric Golgi complex component-related / COG complex component-related	S.X.	H.G.	Please select
0.50	72.4	Ta.6435.1.S1_a_at	CK195702	-	-	8e-1	At2g30810	gibberellin-regulated family protein	S.X.	H.G.	Please select
0.40	58.4	Ta.10271.1.S1_at	CK209140	-	-	8e-21	At1g75850	VPS35B (VPS35 HOMOLOG B)	S.X.	H.G.	Please select
0.19	22.4	Ta.9972.1.S1_at	BQ161449	-	-	1e-2	At2g30100	ubiquitin family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.8	98.7	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.7	98.7	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.7	98.4	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.0	98.0	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.0	98.0	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.9	98.0	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.9	98.0	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.4	97.7	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.3	97.6	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.5	96.9	GSM139919	Anther diplotene-anaphaseI rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.45	3e-166	585	Ta.6850.2.S1_a_at	CA662053	-	-	2e-17	At5g52210	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)	C.G.	S.X.	Please select
0.45	3e-166	585	Ta.6850.2.S1_x_at	CA662053	-	-	2e-17	At5g52210	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)	C.G.	S.X.	Please select
0.45	3e-166	585	Ta.6850.2.S1_at	CA662053	-	-	2e-17	At5g52210	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)	C.G.	S.X.	Please select
0.40	7e-109	395	TaAffx.8054.1.S1_at	CA638115	-	-	3e-7	At5g52210	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)	C.G.	S.X.	Please select
0.09	6e-32	139	Ta.377.1.S1_a_at	CK165523	-	-	2e-2	At5g02502	unknown protein	C.G.	S.X.	Please select
0.02	2e-1	38	TaAffx.64790.1.A1_x_at	BJ275876	-	-	1e-2	At1g11470	-	C.G.	S.X.	Please select
0.03	2e-1	38	Ta.20803.1.S1_at	CA621070	-	-	7e-1	At2g44920	thylakoid lumenal 15 kDa protein, chloroplast	C.G.	S.X.	Please select
0.02	7e-1	36	TaAffx.36635.3.S1_at	BJ290218	-	-	1e+0	At1g31170	SRX (SULFIREDOXIN)	C.G.	S.X.	Please select
0.02	7e-1	36	TaAffx.29322.1.S1_at	CA645515	-	-	4e+0	At4g08270	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.15	8e-19	95	Arabidopsis thaliana	At5g52210	835297	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)	A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	4e-9	63	Glycine max	Gma.9156.1.S1_at	BG511022	-	-	5e-23	At5g52210	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)	C.G.	S.X.	Please select
0.09	2e-18	93	Hordeum vulgare	Contig7818_s_at	Contig7818	-	-	2e-2	At5g02502	unknown protein	C.G.	S.X.	Please select
0.44	2e-125	450	Oryza sativa	Os07g0620400	AF050675.1	-	GTP-binding protein ATGB1 (GTP-bindingprotein-like) (At5g52210)	7e-13	At5g52210	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.18	1e-12	75	Populus trichocarpa	Ptp.5872.1.S1_at	DN499192	hypothetical protein	-	5e-56	At5g52210	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	3e+0	32	Vitis vinifera	1618240_at	CF211533	hypothetical protein LOC100258476	-	3e-13	At1g01650	aspartic-type endopeptidase/ peptidase	C.G.	S.X.	Please select
0.04	5e-3	42	Zea mays	Zm.9986.1.S1_at	BM350777	-	-	5e+0	At4g34790	auxin-responsive family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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