Gene omics information

Query gene ID	Ta.6733.2.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.53	74.9	Ta.6733.2.S1_x_at	CD888689	-	-	2e-35	At5g16070	chaperonin, putative	S.X.	H.G.	Please select
0.73	89.1	Ta.1648.2.A1_x_at	CA606613	-	-	8e-23	At3g18190	chaperonin, putative	S.X.	H.G.	Please select
0.61	82.0	Ta.6282.1.S1_a_at	BJ249264	-	-	1e-4	At5g53480	importin beta-2, putative	S.X.	H.G.	Please select
0.60	81.0	Ta.1648.3.A1_x_at	BQ162378	-	-	8e-8	At3g18190	chaperonin, putative	S.X.	H.G.	Please select
0.50	72.4	Ta.7893.1.S1_at	CD928189	-	-	2e+0	At3g60770	40S ribosomal protein S13 (RPS13A)	S.X.	H.G.	Please select
0.34	48.1	Ta.30947.1.S1_s_at	CK156655	-	-	5e-15	At5g25754	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.3	96.7	GSM298084	Crown tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM298086	Crown tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
3.5	95.4	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM298088	Crown tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.38	0	773	Ta.6733.1.S1_a_at	CD373944	-	-	2e-2	At5g16070	chaperonin, putative	C.G.	S.X.	Please select
0.38	0	773	Ta.6733.1.S1_x_at	CD373944	-	-	2e-2	At5g16070	chaperonin, putative	C.G.	S.X.	Please select
0.14	5e-49	196	TaAffx.55389.1.S1_at	CA667157	-	-	4e-3	At4g35210	unknown protein	C.G.	S.X.	Please select
0.07	2e-23	111	TaAffx.92900.1.S1_at	BJ249351	-	-	2e-5	At3g02530	chaperonin, putative	C.G.	S.X.	Please select
0.04	1e-6	56	TaAffx.83905.1.S1_at	CA648626	-	-	4e+0	At2g47810	NF-YB5 (NUCLEAR FACTOR Y, SUBUNIT B5)	C.G.	S.X.	Please select
0.01	3e-1	38	Ta.246.1.S1_at	AF224499.1	KNOTTED-1-like homeobox protein a /// KNOTTED-1-like homeobox protein d	-	4e-12	At4g08150	KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA)	C.G.	S.X.	Please select
0.01	3e-1	38	Ta.23712.2.S1_at	BJ209413	-	-	2e-10	At3g05420	ACBP4 (ACYL-COA BINDING PROTEIN 4)	C.G.	S.X.	Please select
0.01	1e+0	36	TaAffx.27103.1.S1_at	CA681212	-	-	4e+0	At5g20820	auxin-responsive protein-related	C.G.	S.X.	Please select
0.01	1e+0	36	TaAffx.121855.1.S1_at	BJ209711	-	-	4e+0	At5g49300	zinc finger (GATA type) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.40	2e-35	151	Arabidopsis thaliana	At5g16070	831464	chaperonin, putative	F:unfolded protein binding, protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:cellular_component unknown;BOMFPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.20	3e-32	141	Glycine max	GmaAffx.84803.1.S1_at	BU761560	-	-	2e-60	At5g16070	chaperonin, putative	C.G.	S.X.	Please select
0.87	0	2793	Hordeum vulgare	Contig3922_at	Contig3922	-	-	2e-45	At5g16070	chaperonin, putative	C.G.	S.X.	Please select
0.69	0	1350	Oryza sativa	Os05g0147400	AK062146.1	-	T-complex protein 1, zeta subunit (TCP-1-zeta)(CCT-zeta) (CCT-zeta- 1)	6e-67	At5g16070	chaperonin, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.40	3e-32	141	Populus trichocarpa	PtpAffx.215448.1.S1_at	pmrna29650	hypothetical protein	-	0	At3g02530	chaperonin, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.20	1e-31	137	Vitis vinifera	1615908_at	CF214075	hypothetical protein LOC100249757	-	9e-88	At3g02530	chaperonin, putative	C.G.	S.X.	Please select
0.68	0	1348	Zea mays	Zm.6782.1.A1_at	CF061901	hypothetical protein LOC100193477	-	5e-92	At5g16070	chaperonin, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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