Gene omics information

Query gene ID	Ta.6666.3.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	72.4	Ta.6666.3.S1_x_at	CA720211	-	-	4e-3	At3g03180	Got1-like family protein	S.X.	H.G.	Please select
0.83	93.4	Ta.6666.2.S1_x_at	CA640317	-	-	5e-12	At3g49420	Got1-like family protein	S.X.	H.G.	Please select
0.73	89.1	Ta.5522.2.S1_a_at	CA699425	-	-	1e+0	At2g13150	transcription factor	S.X.	H.G.	Please select
0.67	86.3	Ta.6666.2.S1_at	CA640317	-	-	5e-12	At3g49420	Got1-like family protein	S.X.	H.G.	Please select
0.47	67.9	TaAffx.105929.1.S1_at	BJ226774	-	-	4e+0	At5g19875	unknown protein	S.X.	H.G.	Please select
0.27	35.6	TaAffx.32308.1.S1_at	CA597142	-	-	1e+0	At2g19670	PRMT1A (PROTEIN ARGININE METHYLTRANSFERASE 1A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.0	98.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM143517	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.3	96.7	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.0	96.3	GSM143520	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.0	96.3	GSM143515	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.0	96.3	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM143509	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.9	96.1	GSM143505	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.36	3e-112	404	Ta.6666.1.S1_x_at	BQ170970	-	-	1e-11	At3g49420	Got1-like family protein	C.G.	S.X.	Please select
0.36	3e-112	404	Ta.6666.1.S1_s_at	BQ170970	-	-	1e-11	At3g49420	Got1-like family protein	C.G.	S.X.	Please select
0.45	4e-111	400	Ta.6666.2.S1_at	CA640317	-	-	5e-12	At3g49420	Got1-like family protein	C.G.	S.X.	Please select
0.45	4e-111	400	Ta.6666.2.S1_a_at	CA640317	-	-	5e-12	At3g49420	Got1-like family protein	C.G.	S.X.	Please select
0.45	4e-111	400	Ta.6666.2.S1_x_at	CA640317	-	-	5e-12	At3g49420	Got1-like family protein	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.6111.1.S1_at	CA691303	-	-	3e-1	At5g25490	zinc finger (Ran-binding) family protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.84598.1.S1_at	CA633407	-	-	3e-1	At4g15380	CYP705A4	C.G.	S.X.	Please select
0.01	1e+0	34	TaAffx.28494.1.S1_s_at	CD903785	-	-	1e-3	At2g46370	JAR1 (JASMONATE RESISTANT 1)	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.120588.1.S1_at	CA664645	-	-	1e+0	At3g21150	zinc finger (B-box type) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	4e-3	42	Arabidopsis thaliana	At3g03180	821059	Got1-like family protein	F:molecular_function unknown;P:vesicle-mediated transport;C:cellular_component unknown;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+1	30	Glycine max	PsAffx.psHA008iG09r_s_at	PsAffx.psHA008iG09r	-	-	6e-1	At5g48530	unknown protein	C.G.	S.X.	Please select
0.34	6e-93	339	Hordeum vulgare	Contig9611_at	Contig9611	-	-	6e-7	At3g49420	Got1-like family protein	C.G.	S.X.	Please select
0.13	1e-29	131	Oryza sativa	Os03g0209400	AK059829.1	-	Got1-like protein family protein	9e-6	At5g01430	Got1-like family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	4e-7	56	Populus trichocarpa	PtpAffx.1321.2.S1_a_at	CV243793	hypothetical protein	-	1e-41	At3g49420	Got1-like family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	2e-5	48	Vitis vinifera	1613620_at	CF607400	hypothetical protein LOC100255785	-	2e-40	At3g49420	Got1-like family protein	C.G.	S.X.	Please select
0.15	4e-23	107	Zea mays	Zm.4348.1.A1_at	AI795723	golgi transport 1 protein B	-	7e-6	At3g49420	Got1-like family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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