Gene omics information

Query gene ID	Ta.6591.3.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.92	98.5	Ta.6591.3.S1_x_at	CA646755	-	-	1e+0	At1g73910	ATARP4A (Actin-related proteins 4A)	S.X.	H.G.	Please select
0.73	89.1	Ta.6591.3.S1_a_at	CA646755	-	-	1e+0	At1g73910	ATARP4A (Actin-related proteins 4A)	S.X.	H.G.	Please select
0.47	67.9	Ta.6591.2.S1_x_at	CK193094	-	-	1e-5	At2g33470	GLTP1 (glycolipid transfer protein 1)	S.X.	H.G.	Please select
0.46	66.8	Ta.6591.1.S1_at	CA709047	-	-	6e-4	At2g33470	GLTP1 (glycolipid transfer protein 1)	S.X.	H.G.	Please select
0.40	58.4	Ta.28673.1.S1_at	BJ286336	Vacuolar ATPase subunit F	-	3e-15	At4g02620	vacuolar ATPase subunit F family protein	S.X.	H.G.	Please select
0.40	58.4	Ta.4403.1.S1_at	BJ283628	-	-	1e-41	At2g25610	H+-transporting two-sector ATPase, C subunit family protein	S.X.	H.G.	Please select
0.03	4.7	Ta.9068.1.S1_at	BJ320264	-	-	8e-8	At4g12610	transcription initiation factor IIF alpha subunit (TFIIF-alpha) family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.0	97.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.6	95.6	GSM143507	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.4	95.2	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM143506	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.4	95.2	GSM143518	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.3	95.0	GSM138207	genotype B11 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.2	94.8	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1	94.5	GSM143519	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.1	94.5	GSM143515	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.98	0	904	Ta.6591.3.S1_a_at	CA646755	-	-	1e+0	At1g73910	ATARP4A (Actin-related proteins 4A)	C.G.	S.X.	Please select
0.26	5e-92	337	Ta.6591.2.S1_at	CK193094	-	-	1e-5	At2g33470	GLTP1 (glycolipid transfer protein 1)	C.G.	S.X.	Please select
0.26	5e-92	337	Ta.6591.2.S1_x_at	CK193094	-	-	1e-5	At2g33470	GLTP1 (glycolipid transfer protein 1)	C.G.	S.X.	Please select
0.26	5e-83	307	Ta.6591.1.S1_at	CA709047	-	-	6e-4	At2g33470	GLTP1 (glycolipid transfer protein 1)	C.G.	S.X.	Please select
0.27	4e-31	135	TaAffx.31372.1.S1_x_at	CA616990	-	-	1e-1	At3g58000	VQ motif-containing protein	C.G.	S.X.	Please select
0.27	4e-31	135	TaAffx.31372.1.S1_at	CA616990	-	-	1e-1	At3g58000	VQ motif-containing protein	C.G.	S.X.	Please select
0.06	1e-3	44	Ta.844.1.S1_at	CD453032	-	-	3e-1	At4g25560	AtMYB18 (myb domain protein 18)	C.G.	S.X.	Please select
0.02	7e-2	38	Ta.5248.1.S1_x_at	CD453923	-	-	9e-1	At3g55880	unknown protein	C.G.	S.X.	Please select
0.02	7e-2	38	Ta.5248.2.S1_x_at	CD373899	-	-	2e+0	At2g30985	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	34	Arabidopsis thaliana	At1g73910	843728	ATARP4A (Actin-related proteins 4A)	Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e+0	34	Glycine max	PsAffx.C3000201_at	PsAffx.C3000201	-	-	1e+0	At4g21610	LOL2 (LSD ONE LIKE 2)	C.G.	S.X.	Please select
0.30	2e-89	327	Hordeum vulgare	Contig4409_at	Contig4409	-	-	1e-5	At2g33470	GLTP1 (glycolipid transfer protein 1)	C.G.	S.X.	Please select
0.18	8e-34	145	Oryza sativa	Os02g0622400	AK061679.1	-	Conserved hypothetical protein	2e-9	At2g33470	GLTP1 (glycolipid transfer protein 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	6e+0	32	Populus trichocarpa	PtpAffx.55064.1.A1_at	BP930764	hypothetical protein	-	4e+0	At5g52770	heavy-metal-associated protein-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	34	Vitis vinifera	1619827_at	CF215908	hypothetical protein LOC100245612	-	1e-27	At5g63400	ADK1 (ADENYLATE KINASE 1)	C.G.	S.X.	Please select
0.17	6e-25	113	Zea mays	Zm.4765.1.A1_at	AW461093	hypothetical protein LOC100193642	-	1e-4	At2g33470	GLTP1 (glycolipid transfer protein 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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