CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.6487.1.A1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.78 91.1 Ta.6487.1.A1_at CA659409 - - 1e-7 At3g01890 SWIB complex BAF60b domain-containing protein S.X. H.G.
0.55 76.8 Ta.2358.3.S1_at CA627906 - - 2e+0 At1g15385 unknown protein S.X. H.G.
0.47 67.9 TaAffx.46153.1.S1_at CD933570 - - 8e+0 At5g12235 CLE22 (CLAVATA3/ESR-RELATED 22) S.X. H.G.
0.46 66.8 Ta.26926.1.S1_at CD490881 - - 4e-1 At4g35510 unknown protein S.X. H.G.
0.44 64.5 Ta.8338.2.S1_a_at BJ217268 - - 1e+0 At1g77910 unknown protein S.X. H.G.
0.41 59.6 Ta.2358.3.S1_x_at CA627906 - - 2e+0 At1g15385 unknown protein S.X. H.G.
0.40 58.4 Ta.18260.1.S1_at CA499942 - - 2e-1 At5g53620 unknown protein S.X. H.G.
0.35 49.8 Ta.11802.1.S1_at BQ170830 - - 2e-6 At2g18990 TXND9 (THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 HOMOLOG) S.X. H.G.
0.33 46.9 Ta.2841.1.S1_s_at CK171594 - - 2e-2 At4g20980 eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative S.X. H.G.
0.32 44.4 Ta.23710.2.A1_x_at CK199049 - - 1e-31 At3g13772 endomembrane protein 70, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.3 96.7 GSM139914 Anther pre-meiosis rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8 96.0 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
3.7 95.8 GSM139923 Anther telophaseI-telophaseII rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7 95.8 GSM314269 tissue type: immature inflorescence - rep1 GSE12508 Transcription patterns during wheat development
3.7 95.8 GSM139912 Anther pre-meiosis rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5 95.4 GSM314270 tissue type: immature inflorescence - rep2 GSE12508 Transcription patterns during wheat development
3.5 95.4 GSM139920 Anther diplotene-anaphaseI rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1 94.5 GSM314271 tissue type: immature inflorescence - rep3 GSE12508 Transcription patterns during wheat development
2.9 94.0 GSM139921 Anther diplotene-anaphaseI rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.8 93.6 GSM138192 genotype B33 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.33 7e-105 381 TaAffx.52373.1.S1_s_at CA708480 - - 7e-8 At5g14170 CHC1 C.G. S.X.
0.01 2e+0 34 Ta.14283.1.S1_x_at BU100340 - - 2e-11 At2g21390 coatomer protein complex, subunit alpha, putative C.G. S.X.
0.02 8e+0 32 TaAffx.94898.1.S1_at CK214436 - - 1e-11 At2g34770 FAH1 (FATTY ACID HYDROXYLASE 1) C.G. S.X.
0.02 8e+0 32 TaAffx.80965.1.S1_at CA690705 - - 1e+1 At5g52680 heavy-metal-associated domain-containing protein C.G. S.X.
0.03 8e+0 32 TaAffx.65071.1.A1_at BJ263586 - - 2e+1 At5g14530 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.02 8e+0 32 TaAffx.25931.1.S1_at CA694100 - - 1e+0 At3g19560 F-box family protein C.G. S.X.
0.02 8e+0 32 TaAffx.112439.2.S1_x_at CA618578 - - 4e+0 At5g05550 transcription factor C.G. S.X.
0.02 8e+0 32 TaAffx.112439.2.S1_at CA618578 - - 4e+0 At5g05550 transcription factor C.G. S.X.
0.03 8e+0 32 TaAffx.111948.1.S1_x_at CA629862 - - 2e+0 At2g03955 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 1e-7 57 Arabidopsis thaliana At3g01890 820093 SWIB complex BAF60b domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MFPBO - - - C.G. S.X.
0.06 1e-5 52 Glycine max GmaAffx.43678.1.S1_at AW234730 - - 6e-11 At3g01890 SWIB complex BAF60b domain-containing protein C.G. S.X.
0.89 0 1415 Hordeum vulgare Contig19716_at Contig19716 - - 2e-6 At3g01890 SWIB complex BAF60b domain-containing protein C.G. S.X.
0.43 2e-143 510 Oryza sativa Os.6614.1.S1_at - - - 0 C.G. S.X.
0.15 1e-14 81 Populus trichocarpa PtpAffx.210643.1.S1_at pmrna20877 chromatin remodeling complex subunit - 2e-7 At5g14170 CHC1 C.G. S.X.
0.18 1e-5 50 Vitis vinifera 1613582_at CF204478.1 hypothetical protein LOC100261825 - 6e-12 At5g14170 CHC1 C.G. S.X.
0.36 7e-63 240 Zea mays Zm.4815.1.A1_at AI746001 - - 1e+0 At5g14170 CHC1 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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