Gene omics information

Query gene ID	Ta.6467.1.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.59	79.8	Ta.6467.1.S1_a_at	CK194906	-	-	1e-35	At4g12590	unknown protein	S.X.	H.G.	Please select
0.83	93.4	TaAffx.61855.1.S1_at	CA677991	-	-	3e+0	At3g07510	unknown protein	S.X.	H.G.	Please select
0.44	64.5	Ta.21294.1.A1_at	BQ800635	-	-	1e+0	At4g27340	Met-10+ like family protein	S.X.	H.G.	Please select
0.40	58.4	Ta.6467.1.S1_x_at	CK194906	-	-	1e-35	At4g12590	unknown protein	S.X.	H.G.	Please select
0.32	44.4	Ta.27919.1.S1_at	CK168408	-	-	4e-14	At4g24550	clathrin adaptor complexes medium subunit family protein	S.X.	H.G.	Please select
0.22	27.1	Ta.12582.1.S1_at	BQ171814	-	-	2e+0	At5g51360	-	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.6	97.0	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.0	94.3	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.0	94.3	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.9	94.0	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
2.8	93.6	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.94	0	2052	Ta.6467.1.S1_x_at	CK194906	-	-	1e-35	At4g12590	unknown protein	C.G.	S.X.	Please select
0.57	0	926	Ta.6467.2.A1_at	CK163835	-	-	1e-32	At4g12590	unknown protein	C.G.	S.X.	Please select
0.43	2e-180	632	Ta.6467.3.A1_at	CA630700	-	-	4e+0	At5g67640	unknown protein	C.G.	S.X.	Please select
0.11	2e-19	97	Ta.17070.1.S1_at	CA617285	-	-	7e-1	At5g61410	RPE	C.G.	S.X.	Please select
0.03	3e-15	83	Ta.769.1.S1_at	CD863929	-	-	4e+0	At1g56555	unknown protein	C.G.	S.X.	Please select
0.04	2e-13	77	TaAffx.115378.1.S1_at	CK217862	-	-	5e-9	At5g54160	ATOMT1 (O-METHYLTRANSFERASE 1)	C.G.	S.X.	Please select
0.03	2e-13	77	Ta.8558.1.S1_at	BQ280941	-	-	6e-1	At5g37140	tRNA-splicing endonuclease positive effector-related	C.G.	S.X.	Please select
0.04	2e-13	77	Ta.10426.1.A1_at	CK212973	-	-	2e+0	At5g65640	bHLH093 (beta HLH protein 93)	C.G.	S.X.	Please select
0.03	8e-13	75	TaAffx.98930.1.A1_at	CK214676	CBFIIId-12.1 /// CBFIIId-B12	-	9e+0	At4g34700	complex 1 family protein / LVR family protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.24	1e-35	151	Arabidopsis thaliana	At4g12590	826872	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion, endoplasmic reticulum;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.20	2e-35	151	Glycine max	Gma.8031.1.S1_at	BE823105	-	-	4e-76	At4g12590	unknown protein	C.G.	S.X.	Please select
0.81	0	1572	Hordeum vulgare	Contig5182_at	Contig5182	-	-	9e-34	At4g12590	unknown protein	C.G.	S.X.	Please select
0.56	0	815	Oryza sativa	Os09g0497400	AK068677.1	-	Eukaryotic protein of unknown function DUF850family protein	5e-32	At4g12590	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.20	4e-49	196	Populus trichocarpa	PtpAffx.6864.1.S1_at	CN550052	hypothetical protein	-	2e-96	At4g12590	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.30	9e-22	103	Vitis vinifera	1613866_s_at	CF510932	hypothetical protein LOC100245100	-	2e-68	At4g12590	unknown protein	C.G.	S.X.	Please select
0.53	0	765	Zea mays	Zm.7045.1.A1_at	AY108667.1	protein pob	-	2e-37	At4g12590	unknown protein	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage