Gene omics information

Query gene ID	Ta.6445.2.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.6445.2.S1_x_at	CA594529	-	-	3e+0	At4g01420	CBL5 (CALCINEURIN B-LIKE PROTEIN 5)	S.X.	H.G.	Please select
0.83	93.4	Ta.6445.1.S1_x_at	CK171287	-	-	1e-6	At5g57800	CER3 (ECERIFERUM 3)	S.X.	H.G.	Please select
0.71	88.0	Ta.6445.2.S1_at	CA594529	-	-	3e+0	At4g01420	CBL5 (CALCINEURIN B-LIKE PROTEIN 5)	S.X.	H.G.	Please select
0.50	72.4	Ta.6603.3.S1_a_at	BJ209206	TCER1	-	5e-3	At1g02190	CER1 protein, putative	S.X.	H.G.	Please select
0.50	72.4	Ta.6603.2.S1_x_at	CK207205	TCER1	-	2e-23	At1g02190	CER1 protein, putative	S.X.	H.G.	Please select
0.43	62.2	Ta.6603.1.S1_x_at	CA595922	TCER1	-	6e+0	At5g25500	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
44.5	99.9	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
42.1	99.9	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
40.3	99.9	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
23.1	99.8	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
20.3	99.7	GSM314252	tissue type: germinating seed, coleoptile - rep2	GSE12508	Transcription patterns during wheat development
19.7	99.7	GSM314253	tissue type: germinating seed, coleoptile - rep3	GSE12508	Transcription patterns during wheat development
7.1	98.5	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.0	97.4	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
4.4	96.8	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
4.3	96.7	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.97	0	795	Ta.6445.2.S1_at	CA594529	-	-	3e+0	At4g01420	CBL5 (CALCINEURIN B-LIKE PROTEIN 5)	C.G.	S.X.	Please select
0.21	1e-141	502	Ta.6445.1.S1_x_at	CK171287	-	-	1e-6	At5g57800	CER3 (ECERIFERUM 3)	C.G.	S.X.	Please select
0.13	4e-9	61	Ta.23005.1.S1_at	CA674723	-	-	1e+1	At5g38690	-	C.G.	S.X.	Please select
0.04	1e-2	40	TaAffx.112457.3.S1_at	CA623744	-	-	1e-3	At3g10340	PAL4 (Phenylalanine ammonia-lyase 4)	C.G.	S.X.	Please select
0.02	5e-2	38	TaAffx.7701.1.S1_at	BQ605884	-	-	1e-1	At1g08970	NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9)	C.G.	S.X.	Please select
0.03	8e-1	34	TaAffx.128538.2.S1_at	CA641494	-	-	5e-6	At2g34050	-	C.G.	S.X.	Please select
0.02	8e-1	34	TaAffx.128538.1.S1_at	CA741681	-	-	6e-7	At2g34050	-	C.G.	S.X.	Please select
0.03	8e-1	34	TaAffx.128538.2.S1_s_at	CA641494	-	-	5e-6	At2g34050	-	C.G.	S.X.	Please select
0.05	8e-1	34	TaAffx.106999.1.S1_s_at	CA707945	-	-	7e-3	At5g29000	myb family transcription factor	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e+0	32	Arabidopsis thaliana	At4g01420	826671	CBL5 (CALCINEURIN B-LIKE PROTEIN 5)	Encodes calcineurin B-like protein 5 (CBL5).	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e+0	32	Glycine max	PsAffx.CL1283Contig1_at	PsAffx.CL1283Contig1	-	-	4e+0	At1g01360	unknown protein	C.G.	S.X.	Please select
0.45	6e-74	276	Hordeum vulgare	Contig4823_at	Contig4823	-	-	2e-12	At5g57800	CER3 (ECERIFERUM 3)	C.G.	S.X.	Please select
0.11	2e-58	226	Oryza sativa	Os02g0178800	AK066569.1	-	Sterol desaturase family protein	2e-2	At5g57800	CER3 (ECERIFERUM 3)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	7e-2	38	Populus trichocarpa	PtpAffx.205503.1.S1_at	pmrna10878	hypothetical protein	-	7e-1	At1g68660	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	32	Vitis vinifera	1613825_at	CD798179	hypothetical protein LOC100267587	-	2e-11	At5g27290	unknown protein	C.G.	S.X.	Please select
0.16	1e-59	228	Zea mays	Zm.17186.1.A1_at	BM416697	hypothetical protein LOC100280351	-	5e-5	At5g57800	CER3 (ECERIFERUM 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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