CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.641.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.93 98.7 Ta.641.1.S1_at BG906659 - - 7e-4 At1g19660 wound-responsive family protein S.X. H.G.
0.68 86.5 Ta.23163.1.A1_at CK216129 - - 3e-1 At1g06770 DRIP1 (DREB2A-INTERACTING PROTEIN 1) S.X. H.G.
0.61 82.0 Ta.12065.1.S1_at BQ171511 - - 2e+0 At3g45000 VPS24.2 S.X. H.G.
0.61 82.0 Ta.568.1.S1_at BG908569 - - 1e-24 At2g13360 AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE) S.X. H.G.
0.60 81.0 Ta.27772.1.S1_at CK214105 - - 4e-9 At3g14415 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative S.X. H.G.
0.58 79.2 TaAffx.30393.1.S1_at CA624950 - - 2e-12 At2g47910 CRR6 (chlororespiratory reduction 6) S.X. H.G.
0.58 79.2 Ta.1147.3.S1_at BG908516 - - 2e+1 At5g41420 unknown protein S.X. H.G.
0.57 79.2 Ta.28197.1.S1_at BQ620267 - - 2e-60 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative S.X. H.G.
0.56 78.6 Ta.21717.2.S1_at CA683130 - - 4e+0 At3g61090 unknown protein S.X. H.G.
0.56 78.6 Ta.28775.1.S1_x_at CA680217 - - 5e-39 At1g68010 HPR S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.7 98.9 GSM324495 Si+ B+ rep3 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.2 98.5 GSM143523 Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.1 98.5 GSM324484 Si- B- rep1 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.9 98.4 GSM324492 Si+ B- rep3 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.8 98.4 GSM143525 Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.1 98.1 GSM324494 Si+ B+ rep2 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.8 97.9 GSM250915 TcLr1_7dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7 97.9 GSM250910 TcLr1_7dpi_inoculated_rep2 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6 97.8 GSM250901 Tc_7dpi_mock_rep1 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6 97.8 GSM143526 Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 1e-85 317 Ta.641.2.S1_at BJ257632 - - 3e-1 At2g20616 unknown protein C.G. S.X.
0.28 6e-63 242 Ta.641.3.S1_at CA656674 - - 4e+0 At5g18380 40S ribosomal protein S16 (RPS16C) C.G. S.X.
0.28 6e-63 242 Ta.641.3.S1_a_at CA656674 - - 4e+0 At5g18380 40S ribosomal protein S16 (RPS16C) C.G. S.X.
0.18 8e-50 198 Ta.502.3.A1_at BG909010 - - 8e+0 At5g13830 FtsJ-like methyltransferase family protein C.G. S.X.
0.39 3e-49 196 Ta.26655.1.S1_at CD491484 - - 4e-1 Atmg00740 - C.G. S.X.
0.01 7e-1 36 Ta.7081.1.S1_at BE515826 - - 2e-32 At1g06700 serine/threonine protein kinase, putative C.G. S.X.
0.02 3e+0 34 TaAffx.96294.1.S1_at CA660095 - - 1e+1 At5g04470 SIM (SIAMESE) C.G. S.X.
0.02 3e+0 34 TaAffx.38259.1.S1_at BJ242900 - - 6e+0 At5g67450 AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1) C.G. S.X.
0.02 3e+0 34 Ta.6987.2.S1_at BJ313441 - - 4e-1 At2g25290 binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 7e-4 46 Arabidopsis thaliana At1g19660 838553 wound-responsive family protein F:unknown;P:response to wounding;C:unknown;BOPA - - - C.G. S.X.
0.04 1e-3 46 Glycine max GmaAffx.3619.1.S1_at BQ785103 - - 5e-76 At1g75380 wound-responsive protein-related C.G. S.X.
0.77 0 856 Hordeum vulgare Contig4701_at Contig4701 - - 2e-1 At1g19660 wound-responsive family protein C.G. S.X.
0.50 9e-122 438 Oryza sativa Os01g0702000 AK065414.1 - Conserved hypothetical protein 4e-5 At1g75380 wound-responsive protein-related C.G. S.X.
0.04 1e-2 42 Populus trichocarpa PtpAffx.10771.4.S1_at BU894833 hypothetical protein - 2e-28 At1g75380 wound-responsive protein-related C.G. S.X.
0.04 8e-4 44 Vitis vinifera 1621693_at BQ792185 hypothetical protein LOC100248963 - 5e-73 At1g75380 wound-responsive protein-related C.G. S.X.
0.32 2e-26 119 Zea mays Zm.3569.1.A1_at CO518726 hypothetical protein LOC100280101 - 5e+0 At3g55600 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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