CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.640.3.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.640.3.S1_at CA598400 - - 1e+0 At4g09270 unknown protein S.X. H.G.
0.65 83.9 TaAffx.30435.1.S1_at CA625345 - - 9e-1 At5g47700 60S acidic ribosomal protein P1 (RPP1C) S.X. H.G.
0.65 83.9 TaAffx.57764.1.S1_at CA625262 - - 4e+0 At1g27950 LTPG1 (GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1) S.X. H.G.
0.63 83.1 TaAffx.81536.2.S1_s_at CA688555 - - 2e-1 At4g17040 ATP-dependent Clp protease proteolytic subunit, putative S.X. H.G.
0.62 82.3 Ta.26301.1.A1_at CD490595 - - 2e+0 At1g75460 ATP-dependent protease La (LON) domain-containing protein S.X. H.G.
0.60 81.0 Ta.7193.3.S1_at CA718160 - - 1e+1 At5g08400 unknown protein S.X. H.G.
0.60 81.0 TaAffx.115939.2.S1_at CA677586 - - 7e-2 At1g30800 - S.X. H.G.
0.58 79.2 TaAffx.118620.1.S1_at BJ316617 - - 1e+0 At2g31560 unknown protein S.X. H.G.
0.58 79.2 Ta.16201.1.S1_at CA602442 - - 3e+0 At5g57535 unknown protein S.X. H.G.
0.57 79.2 TaAffx.85941.1.S1_at CA618291 - - 2e+1 At5g23760 heavy-metal-associated domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.0 99.6 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.3 99.3 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.7 99.1 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.2 98.8 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
8.0 98.8 GSM298090 Leaf tissue of Solstice at 5 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
7.9 98.7 GSM250897 TcLr1_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.9 98.7 GSM298068 Leaf tissue of Paragon at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
6.8 98.4 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
5.8 97.9 GSM250895 Tc_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6 97.8 GSM298089 Leaf tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 3e-50 198 Ta.640.2.S1_a_at CA497517 - - 5e+0 At2g45170 AtATG8e C.G. S.X.
0.04 7e-2 38 TaAffx.59798.1.S1_at CA595206 - - 4e+0 At4g39300 unknown protein C.G. S.X.
0.03 3e-1 36 TaAffx.80486.1.S1_at CA696323 - - 1e+0 At5g66815 unknown protein C.G. S.X.
0.03 3e-1 36 TaAffx.110270.1.S1_at CA661857 - - 4e+0 At4g02360 unknown protein C.G. S.X.
0.03 3e-1 36 TaAffx.110270.1.S1_x_at CA661857 - - 4e+0 At4g02360 unknown protein C.G. S.X.
0.03 3e-1 36 Ta.28653.1.S1_at CK200106 - - 3e-2 At3g23830 GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4) C.G. S.X.
0.04 1e+0 34 TaAffx.82949.1.S1_at CA664497 - - 2e-1 At2g45430 DNA-binding protein-related C.G. S.X.
0.04 1e+0 34 TaAffx.50900.1.S1_at CA733592 - - 1e+0 At5g42180 peroxidase 64 (PER64) (P64) (PRXR4) C.G. S.X.
0.03 1e+0 34 TaAffx.12992.1.A1_at BJ220177 - - 2e+0 At1g64370 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e+0 34 Arabidopsis thaliana At4g09270 826510 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOB - - - C.G. S.X.
0.05 2e-2 40 Glycine max GmaAffx.12946.1.S1_at AW508242 - - 7e-5 At5g60480 AtHB26 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 26) C.G. S.X.
0.16 1e-41 169 Hordeum vulgare Contig9937_at Contig9937 - - 3e+0 At4g24026 unknown protein C.G. S.X.
0.04 8e-3 42 Oryza sativa Os02g0547500 9630.m03265 - - 2e+0 At5g27910 NF-YC8 (NUCLEAR FACTOR Y, SUBUNIT C8) C.G. S.X.
0.05 1e+0 34 Populus trichocarpa PtpAffx.224068.1.S1_at pmrna42305 hypothetical protein - 3e+0 At1g18800 NRP2 (NAP1-RELATED PROTEIN 2) C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1622597_at CF212895 hypothetical protein LOC100244242 - 1e-4 At3g43520 unknown protein C.G. S.X.
0.03 2e+0 32 Zea mays Zm.7598.1.A1_at CF629653 - - 3e-3 At2g40510 40S ribosomal protein S26 (RPS26A) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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